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Two proteins are homologous if they have a common evolutionary origin, and the binary classification problem is to identify proteins in a candidate set that are homologous to a particular native protein. The feature (explanatory) variables…

机器学习 · 统计学 2019-09-11 Jabed H Tomal , William J Welch , Ruben H Zamar

Tomal et al. (2015) introduced the notion of "phalanxes" in the context of rare-class detection in two-class classification problems. A phalanx is a subset of features that work well for classification tasks. In this paper, we propose a…

机器学习 · 统计学 2017-07-05 Hongyang Zhang , William J. Welch , Ruben H. Zamar

The development of enhanced sampling methods has greatly extended the scope of atomistic simulations, allowing long-time phenomena to be studied with accessible computational resources. Many such methods rely on the identification of an…

计算物理 · 物理学 2022-06-08 Luigi Bonati , GiovanniMaria Piccini , Michele Parrinello

Advances in data collecting technologies in genomics have significantly increased the need for tools designed to study the genetic basis of many diseases. Effective statistical methods should excel in both prediction accuracy and biomarker…

统计方法学 · 统计学 2025-11-13 Anthony-Alexander Christidis , Stefan Van Aelst , Ruben Zamar

Many data sets consist of variables with an inherent group structure. The problem of group selection has been well studied, but in this paper, we seek to do the opposite: our goal is to select at least one variable from each group in the…

统计方法学 · 统计学 2015-05-29 Frederick Campbell , Genevera I. Allen

Model-based clustering integrated with variable selection is a powerful tool for uncovering latent structures within complex data. However, its effectiveness is often hindered by challenges such as identifying relevant variables that define…

In many social, economical, biological and medical studies, one objective is to classify a subject into one of several classes based on a set of variables observed from the subject. Because the probability distribution of the variables is…

统计理论 · 数学 2011-05-19 Jun Shao , Yazhen Wang , Xinwei Deng , Sijian Wang

Classification is one of the most popular and widely used supervised learning tasks, which categorizes objects into predefined classes based on known knowledge. Classification has been an important research topic in machine learning and…

机器学习 · 计算机科学 2015-03-13 Jian-Ping Mei , Chee-Keong Kwoh , Peng Yang , Xiao-Li Li

While variable selection is essential to optimize the learning complexity by prioritizing features, automating the selection process is preferred since it requires laborious efforts with intensive analysis otherwise. However, it is not an…

机器学习 · 计算机科学 2019-10-29 Makiya Nakashima , Alex Sim , Youngsoo Kim , Jonghyun Kim , Jinoh Kim

The relevance of machine learning (ML) in our daily lives is closely intertwined with its explainability. Explainability can allow end-users to have a transparent and humane reckoning of a ML scheme's capability and utility. It will also…

机器学习 · 计算机科学 2022-12-27 Payel Sadhukhan , Sarbani palit , Kausik Sengupta

In critical applications of anomaly detection including computer security and fraud prevention, the anomaly detector must be configurable by the analyst to minimize the effort on false positives. One important way to configure the anomaly…

机器学习 · 计算机科学 2018-09-19 Shubhomoy Das , Md Rakibul Islam , Nitthilan Kannappan Jayakodi , Janardhan Rao Doppa

We propose a new method to define anomaly scores and apply this to particle physics collider events. Anomalies can be either rare, meaning that these events are a minority in the normal dataset, or different, meaning they have values that…

高能物理 - 唯象学 · 物理学 2022-03-09 Sascha Caron , Luc Hendriks , Rob Verheyen

Active Learning is a very common yet powerful framework for iteratively and adaptively sampling subsets of the unlabeled sets with a human in the loop with the goal of achieving labeling efficiency. Most real world datasets have imbalance…

计算机视觉与模式识别 · 计算机科学 2022-06-20 Suraj Kothawade , Shivang Chopra , Saikat Ghosh , Rishabh Iyer

Classifications organize entities into categories that identify similarities within a category and discern dissimilarities among categories, and they powerfully classify information in support of analysis. We propose a new classification…

最优化与控制 · 数学 2022-09-05 Casey Garner , Allen Holder

Gathering training data is a key step of any supervised learning task, and it is both critical and expensive. Critical, because the quantity and quality of the training data has a high impact on the performance of the learned function.…

数据结构与算法 · 计算机科学 2021-10-28 Quentin Lutz , Élie de Panafieu , Alex Scott , Maya Stein

The ability to automatically discover interpretable mathematical models from data could forever change how we model soft matter systems. For convex discovery problems with a unique global minimum, model discovery is well-established. It…

软凝聚态物质 · 物理学 2024-04-11 Kevin Linka , Ellen Kuhl

The fundamental task of classification given a limited number of training data samples is considered for physical systems with known parametric statistical models. The standalone learning-based and statistical model-based classifiers face…

机器学习 · 计算机科学 2022-02-01 Alireza Nooraiepour , Waheed U. Bajwa , Narayan B. Mandayam

High-dimensional complex systems can be studied through multivariate analysis, as Principal Component Analysis, however large samples of observations frequently are needed for it. Here it is examined a method for small samples based on…

应用统计 · 统计学 2017-06-16 Dimitri Marques Abramov

Ensembles are a straightforward, remarkably effective method for improving the accuracy,calibration, and robustness of models on classification tasks; yet, the reasons that underlie their success remain an active area of research. We build…

机器学习 · 统计学 2022-06-22 Neha Gupta , Jamie Smith , Ben Adlam , Zelda Mariet

Molecular representation learning is pivotal for various molecular property prediction tasks related to drug discovery. Robust and accurate benchmarks are essential for refining and validating current methods. Existing molecular property…

化学物理 · 物理学 2024-06-27 Shikun Feng , Jiaxin Zheng , Yinjun Jia , Yanwen Huang , Fengfeng Zhou , Wei-Ying Ma , Yanyan Lan
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