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Very low levels of genetic diversity have been reported in vertebrates with large genomes, notably salamanders and lungfish [1-3]. Interpreting differences in heterozygosity, which reflects genetic diversity in a population, is complicated…

基因组学 · 定量生物学 2013-09-05 John Herrick , Bianca Sclavi

Darwin introduced the concept of the "living fossil" to describe species belonging to lineages that have experienced little evolutionary change, and suggested that species in more slowly evolving lineages are more prone to extinction (1).…

基因组学 · 定量生物学 2013-02-12 Bianca Sclavi , John Herrick

Constraints in embryonic development are thought to bias the direction of evolution by making some changes less likely, and others more likely, depending on their consequences on ontogeny. Here, we characterize the constraints acting on…

种群与进化 · 定量生物学 2012-03-08 J. Roux , M. Robinson-Rechavi

Salamanders (urodela) have among the largest vertebrate genomes, ranging in size from 10 to over 80 pg. The urodela are divided into ten extant families each with a characteristic range in genome size. Although changes in genome size often…

基因组学 · 定量生物学 2015-03-10 Bianca Sclavi , John Herrick

Estimation of molecular evolutionary divergence times requires models of rate change. These vary with regard to the assumption of what quantity is penalized. The possibilities considered are the rate of evolution, the log of the rate of…

基因组学 · 定量生物学 2007-12-31 Peter J Waddell

Predicting evolution of expanding populations is critical to control biological threats such as invasive species and cancer metastasis. Expansion is primarily driven by reproduction and dispersal, but nature abounds with examples of…

种群与进化 · 定量生物学 2019-04-26 Maxime Deforet , Carlos Carmona-Fontaine , Kirill S. Korolev , Joao B. Xavier

We study the following family of evolutionary 1+1 PDEs that describe the balance between convection and stretching for small viscosity in the dynamics of 1D nonlinear waves in fluids: \[ m_t + \underbrace{um_x \}…

混沌动力学 · 物理学 2009-11-07 Darryl D. Holm , Martin F. Staley

Depending on multiple parameters, soft robots can exhibit different modes of locomotion that are difficult to model numerically. As a result, improving their performance is complex, especially in small-scale systems characterized by low…

机器人学 · 计算机科学 2025-05-30 Mikołaj Rogóż , Zofia Dziekan , Piotr Wasylczyk

The expansion of a population into new habitat is a transient process that leaves its footprints in the genetic composition of the expanding population. How the structure of the environment shapes the population front and the evolutionary…

种群与进化 · 定量生物学 2018-11-26 Daniel A. Beller , Kim M. J. Alards , Francesca Tesser , Ricardo A. Mosna , Federico Toschi , Wolfram Möbius

Tidal forces acting on galaxies in clusters lead to a strong dynamical evolution. In order to quantify the amount of evolution, I run self-consistent N-body simulations of disk galaxies for a variety of models in the hierarchically forming…

天体物理学 · 物理学 2008-11-26 Oleg Y. Gnedin

In a population of size N, adaptive evolution is 2N times faster under Mendelian inheritance than the rate implied by Victorian theories of heredity and evolution.

种群与进化 · 定量生物学 2021-08-03 Alan R. Rogers

Sex chromosomes have evolved repeatedly across the Tree of Life, yet their evolutionary fates differ strikingly. In sharp contrast to mammals and birds with degenerated, stable Y/W chromosomes, in most amphibians, teleosts, non avian…

种群与进化 · 定量生物学 2026-03-24 Wen-Juan Ma , Ricard Fontserè , Tristan Cornelis , Paris Veltsos , Qi Zhou

We analyse a series of bacterial growth models with in-built inter-individual variation in rates of cell division. We show that this variation leads to reduced population growth in favorable regimes and reduced population killing in…

种群与进化 · 定量生物学 2025-11-05 John A. Mackenzie , Adam Hillman , M. Gabriela M. Gomes

Empirical observations in marine ecosystems have suggested a balance of biological and advection time scales as a possible explanation of species coexistence. To characterise this scenario, we measure the time to fixation in neutrally…

种群与进化 · 定量生物学 2018-04-09 Tobias Galla , Vicente Pérez-Muñuzuri

As organisms are faced with intense rapidly changing selective pressures, new genetic material is required to facilitate adaptation. Among sources of genetic novelty, gene duplications and transposable elements (TEs) offer new genes or new…

The natural evolution of life seems to proceed through steps characterized by phases of relatively rapid changes, followed by longer, more stable periods. In the light of the string-theory derived physical scenario proposed in [1], we…

综合物理 · 物理学 2007-12-06 Andrea Gregori

Many marine invertebrates have larval stages covered in linear arrays of beating cilia, which propel the animal while simultaneously entraining planktonic prey. These bands are strongly conserved across taxa spanning four major superphyla,…

流体动力学 · 物理学 2017-02-14 William Gilpin , Vivek N. Prakash , Manu Prakash

Recent methodological advances are enabling better examination of speciation and extinction processes and patterns. A major open question is the origin of large discrepancies in species number between groups of the same age. Existing…

种群与进化 · 定量生物学 2015-09-01 Sacha Laurent , Marc Robinson-Rechavi , Nicolas Salamin

Understanding the relationship between taxonomic and morphological changes is important in identifying the reasons for accelerated morphological diversification early in the history of animal phyla. Here, a simple general model describing…

adap-org · 物理学 2007-05-23 Sergey Gavrilets

Stronger selection implies faster evolution---that is, the greater the force, the faster the change. This apparently self-evident proposition, however, is derived under the assumption that genetic variation within a population is primarily…

种群与进化 · 定量生物学 2017-08-18 Masahiko Ueda , Nobuto Takeuchi , Kunihiko Kaneko
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