相关论文: Enumeration of sequences with large alphabets

An asymptotically optimal trellis-coded modulation (TCM) encoder requires the joint design of the encoder and the binary labeling of the constellation. Since analytical approaches are unknown, the only available solution is to perform an…

We present a one-shot method for compressing large labeled graphs called Random Edge Coding. When paired with a parameter-free model based on P\'olya's Urn, the worst-case computational and memory complexities scale quasi-linearly and…

We study codes that are list-decodable under insertions and deletions. Specifically, we consider the setting where a codeword over some finite alphabet of size $q$ may suffer from $\delta$ fraction of adversarial deletions and $\gamma$…

Enumerating characteristic substrings (e.g., maximal repeats, minimal unique substrings, and minimal absent words) in a given string has been an important research topic because there are a wide variety of applications in various areas such…

We consider document listing on string collections, that is, finding in which strings a given pattern appears. In particular, we focus on repetitive collections: a collection of size $N$ over alphabet $[1,\sigma]$ is composed of $D$ copies…

We study some essential arithmetic properties of a new tree-based number representation, {\em hereditarily binary numbers}, defined by applying recursively run-length encoding of bijective base-2 digits. Our representation expresses giant…

Sequence segmentation is a well-studied problem, where given a sequence of elements, an integer K, and some measure of homogeneity, the task is to split the sequence into K contiguous segments that are maximally homogeneous. A classic…

We propose a randomized algorithm for training Support vector machines(SVMs) on large datasets. By using ideas from Random projections we show that the combinatorial dimension of SVMs is $O({log} n)$ with high probability. This estimate of…

Cyclotomic polynomials are basic objects in Number Theory. Their properties depend on the number of distinct primes that intervene in the factorization of their order, and the binary case is thus the first nontrivial case. This paper sees…

In many data analysis pipelines, a basic and time-consuming process is to produce join results and feed them into downstream tasks. Numerous enumeration algorithms have been developed for this purpose. To be a statistically meaningful…

We present a constraint-coding scheme to correct asymmetric magnitude-$1$ errors in multi-level non-volatile memories. For large numbers of such errors, the scheme is shown to deliver better correction capability compared to known…

Non-uniquely decodable codes can be defined as the codes that cannot be uniquely decoded without additional disambiguation information. These are mainly the class of non-prefix-free codes, where a codeword can be a prefix of other(s), and…

The paper addresses challenges in storing and retrieving sequences in contexts like anomaly detection, behavior prediction, and genetic information analysis. Associative Knowledge Graphs (AKGs) offer a promising approach by leveraging…

The k-Tree algorithm [Wagner 02] is a non-trivial algorithm for the average-case k-SUM problem that has found widespread use in cryptanalysis. Its input consists of k lists, each containing n integers from a range of size m. Wagner's…

The rank and select operations over a string of length n from an alphabet of size $\sigma$ have been used widely in the design of succinct data structures. In many applications, the string itself need be maintained dynamically, allowing…

Large language models (LLMs) have recently enabled remarkable progress in text representation. However, their embeddings are typically high-dimensional, leading to substantial storage and retrieval overhead. Although recent approaches such…

Assume that an $N$-bit sequence $S$ of $k$ numbers encoded as Elias gamma codes is given as input. We present space-efficient algorithms for sorting, dense ranking and competitive ranking on $S$ in the word RAM model with word size…

Minimizer schemes, or just minimizers, are a very important computational primitive in sampling and sketching biological strings. Assuming a fixed alphabet of size $\sigma$, a minimizer is defined by two integers $k,w\ge2$ and a total order…

We propose novel algorithms for sequence prediction based on ideas from stringology. These algorithms are time and space efficient and satisfy mistake bounds related to particular stringological complexity measures of the sequence. In this…

In this paper, we present a new data structure called the packed compact trie (packed c-trie) which stores a set $S$ of $k$ strings of total length $n$ in $n \log\sigma + O(k \log n)$ bits of space and supports fast pattern matching queries…