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The solution space of genome-scale models of cellular metabolism provides a map between physically viable flux configurations and cellular metabolic phenotypes described, at the most basic level, by the corresponding growth rates. By…

分子网络 · 定量生物学 2016-05-30 Daniele De Martino , Fabrizio Capuani , Andrea De Martino

Body mass is a major life history trait and provides a scale for all living processes of organisms. Unfortunately body mass cannot be easily measured for many species, because of the logistical difficulties involved in actually catching and…

种群与进化 · 定量生物学 2007-05-23 J. Y. Georges , S. Fossette

The size distribution and orbital architecture of dust, grains, boulders, asteroids, and major planets during the giant branch phases of evolution dictate the preponderance and observability of the eventual debris, which have been found to…

地球与行星天体物理 · 物理学 2020-07-20 Euaggelos E. Zotos , Dimitri Veras

The abundance of a species' population in an ecosystem is rarely stationary, often exhibiting large fluctuations over time. Using historical data on marine species, we show that the year-to-year fluctuations of population growth rate obey a…

适应与自组织系统 · 物理学 2015-06-02 Jie Sun , Sean P. Cornelius , John Janssen , Kimberly A. Gray , Adilson E. Motter

Frequency dependent selection and demographic fluctuations play important roles in evolutionary and ecological processes. Under frequency dependent selection, the average fitness of the population may increase or decrease based on…

种群与进化 · 定量生物学 2015-06-23 Weini Huang , Christoph Hauert , Arne Traulsen

The evolution of planetary systems around white dwarfs is crucial to understanding the presence of planetary material in the atmospheres of white dwarfs. These systems uniquely probe exoplanetary compositions. Periodic signals in the…

地球与行星天体物理 · 物理学 2025-06-26 Yuqi Li , Amy Bonsor , Oliver Shorttle , Laura K. Rogers

We consider a continuum version of a previously introduced and numerically studied model of macroevolution (PRL 75, 2055, (1995)) in which agents evolve by an optimization process in a rugged fitness landscape and die due to their…

生物物理 · 物理学 2009-10-30 Paolo Sibani

Time evolution of number of species (genera, families, and others), population of them, and size distribution of present ones and life times are studied in terms of a new model, where population of each genetic taxon increases by a (random)…

种群与进化 · 定量生物学 2007-05-23 Caglar Tuncay

Time series of cell size evolution in unicellular marine algae (division Haptophyta; Coccolithus lineage), covering 57 million years, are studied by a system of linear stochastic differential equations of hierarchical structure. The data…

应用统计 · 统计学 2013-01-09 Trond Reitan , Tore Schweder , Jorijntje Henderiks

Traditionally evolution is seen as a process where from a pool of possible variations of a population (e.g. biological species or industrial goods) a few variations get selected which survive and proliferate, whereas the others vanish.…

种群与进化 · 定量生物学 2008-09-25 Rudolf Hanel , Stefan Thurner

Why, contrary to theoretical predictions, do marine microbe communities harbor tremendous phenotypic heterogeneity? How can so many marine microbe species competing in the same niche coexist? We discovered a unifying explanation for both…

种群与进化 · 定量生物学 2021-08-06 Susanne Menden-Deuer , Medet Nursultanov , Sinead Collins , Tatiana Rynearson , Julie Rowlett

Many mathematical frameworks of evolutionary game dynamics assume that the total population size is constant and that selection affects only the relative frequency of strategies. Here, we consider evolutionary game dynamics in an extended…

种群与进化 · 定量生物学 2018-02-16 Alex McAvoy , Nicolas Fraiman , Christoph Hauert , John Wakeley , Martin A. Nowak

In the interest of conservation, the importance of having a large habitat available for a species is widely known. Here, we introduce a lattice-based model for a population and look at the importance of fluctuations as well as that of the…

种群与进化 · 定量生物学 2007-05-23 Alastair Windus , Henrik Jeldtoft Jensen

Metabolism and evolution are closely connected: if a mutation incurs extra energetic costs for an organism, there is a baseline selective disadvantage that may or may not be compensated for by other adaptive effects. A long-standing, but to…

种群与进化 · 定量生物学 2019-06-19 Efe Ilker , Michael Hinczewski

A central question in developmental biology is how size and position are determined. The genetic code carries instructions on how to control these properties in order to regulate the pattern and morphology of structures in the developing…

细胞行为 · 定量生物学 2016-12-05 Krishna Garikipati

We study the Tangled Nature model of macro evolution and demonstrate that the co-evolutionary dynamics produces an increasingly correlated core of well occupied types. At the same time the entire configuration of types becomes increasing…

统计力学 · 物理学 2015-03-13 Dominic Jones , Henrik Jeldtoft Jensen , Paolo Sibani

We present a study of the hypothesis that white dwarfs undergo a spectral change from hydrogen- to helium-dominated atmospheres using a volume-limited photometric sample drawn from the $Gaia$ DR2 catalogue, the Sloan Digital Sky Survey…

太阳与恒星天体物理 · 物理学 2020-01-22 Tim Cunningham , Pier-Emmanuel Tremblay , Nicola Pietro Gentile Fusillo , Mark Hollands , Elena Cukanovaite

Animal behavior is shaped by a myriad of mechanisms acting on a wide range of scales, which hampers quantitative reasoning and the identification of general principles. Here, we combine data analysis and theory to investigate the…

统计力学 · 物理学 2024-04-25 Antonio Carlos Costa , Gautam Sridhar , Claire Wyart , Massimo Vergassola

Allometric scaling is one of the most pervasive laws in biology. Its origin, however, is still a matter of dispute. Recent studies have established that maximum metabolic rate scales with an exponent larger than that found for basal…

生物物理 · 物理学 2007-05-23 Lauro A. Barbosa , Guilherme J. M. Garcia , Jafferson K. L. da Silva

The hydrogen isotopic (D/H) ratio reflects the global cycling and evolution of water on Earth as it fractionates through planetary processes. We model the water cycle taking seafloor hydrothermal alteration, chemical alteration of…

地球与行星天体物理 · 物理学 2018-07-18 Hiroyuki Kurokawa , Julien Foriel , Matthieu Laneuville , Christine Houser , Tomohiro Usui