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Maximum entropy models are the least structured probability distributions that exactly reproduce a chosen set of statistics measured in an interacting network. Here we use this principle to construct probabilistic models which describe the…

神经元与认知 · 定量生物学 2014-01-28 Gašper Tkačik , Olivier Marre , Dario Amodei , Elad Schneidman , William Bialek , Michael J Berry

The efficient coding theory postulates that single cells in a neuronal population should be optimally configured to efficiently encode information about a stimulus subject to biophysical constraints. This poses the question of how multiple…

神经元与认知 · 定量生物学 2023-08-11 Shuai Shao , Markus Meister , Julijana Gjorgjieva

Understanding how stimuli and synaptic connectivity in uence the statistics of spike patterns in neural networks is a central question in computational neuroscience. Maximum Entropy approach has been successfully used to characterize the…

生物物理 · 物理学 2016-11-26 Rodrigo Cofre , Bruno Cessac

Mammalian spatial navigation relies on specialized neurons, such as place and grid cells, which encode position based on self-motion and environmental cues. While extensive research has explored the computational role of grid cells, the…

神经元与认知 · 定量生物学 2026-03-02 Jared Deighton , Wyatt Mackey , Ioannis Schizas , David L. Boothe , Vasileios Maroulas

In this work we explore encoding strategies learned by statistical models of sensory coding in noisy spiking networks. Early stages of sensory communication in neural systems can be viewed as encoding channels in the information-theoretic…

神经元与认知 · 定量生物学 2020-06-30 M. E. Rule , M. Sorbaro , M. H. Hennig

A major goal in neuroscience is to understand how populations of neurons code for stimuli or actions. While the number of neurons that can be recorded simultaneously is increasing at a fast pace, in most cases these recordings cannot access…

神经元与认知 · 定量生物学 2019-04-10 Oleksandr Sorochynskyi , Stéphane Deny , Olivier Marre , Ulisse Ferrari

Correlations in sensory neural networks have both extrinsic and intrinsic origins. Extrinsic or stimulus correlations arise from shared inputs to the network, and thus depend strongly on the stimulus ensemble. Intrinsic or noise…

神经元与认知 · 定量生物学 2018-11-05 Ulisse Ferrari , Stephane Deny , Matthew Chalk , Gasper Tkacik , Olivier Marre , Thierry Mora

Neuromorphic applications emulate the processing performed by the brain by using spikes as inputs instead of time-varying analog stimuli. Therefore, these time-varying stimuli have to be encoded into spikes, which can induce important…

神经与进化计算 · 计算机科学 2024-12-30 Ahmad El Ferdaoussi , Eric Plourde , Jean Rouat

The principles of neural encoding and computations are inherently collective and usually involve large populations of interacting neurons with highly correlated activities. While theories of neural function have long recognized the…

神经元与认知 · 定量生物学 2019-05-14 Christophe Gardella , Olivier Marre , Thierry Mora

The mutual information between stimulus and spike-train response is commonly used to monitor neural coding efficiency, but neuronal computation broadly conceived requires more refined and targeted information measures of input-output joint…

神经元与认知 · 定量生物学 2015-04-21 Sarah E. Marzen , Michael R. DeWeese , James P. Crutchfield

Neural networks encode information through their collective spiking activity in response to external stimuli. This population response is noisy and strongly correlated, with complex interplay between correlations induced by the stimulus,…

神经元与认知 · 定量生物学 2022-11-28 Gabriel Mahuas , Olivier Marre , Thierry Mora , Ulisse Ferrari

In synaptic molecular communication (MC), the activation of postsynaptic receptors by neurotransmitters (NTs) is governed by a stochastic reaction-diffusion process. This randomness of synaptic MC contributes to the randomness of the…

亚细胞过程 · 定量生物学 2023-01-18 Sebastian Lotter , Maximilian Schäfer , Robert Schober

To compensate for sensory processing delays, the visual system must make predictions to ensure timely and appropriate behaviors. Recent work has found predictive information about the stimulus in neural populations early in vision…

神经元与认知 · 定量生物学 2018-10-05 Audrey J. Sederberg , Jason N. MacLean , Stephanie E. Palmer

The mammalian brain is a metabolically expensive device, and evolutionary pressures have presumably driven it to make productive use of its resources. For sensory areas, this concept has been expressed more formally as an optimality…

神经元与认知 · 定量生物学 2016-03-02 Deep Ganguli , Eero P. Simoncelli

Parallel recordings of neural spike counts have revealed the existence of context-dependent noise correlations in neural populations. Theories of population coding have also shown that such correlations can impact the information encoded by…

机器学习 · 计算机科学 2025-07-30 Sacha Sokoloski , Ruben Coen-Cagli

Our knowledge of the sensory world is encoded by neurons in sequences of discrete, identical pulses termed action potentials or spikes. There is persistent controversy about the extent to which the precise timing of these spikes is relevant…

神经元与认知 · 定量生物学 2007-05-23 Ilya Nemenman , Geoffrey D. Lewen , William Bialek , Rob R. de Ruyter van Steveninck

Modeling neural population dynamics underlying noisy single-trial spiking activities is essential for relating neural observation and behavior. A recent non-recurrent method - Neural Data Transformers (NDT) - has shown great success in…

神经元与认知 · 定量生物学 2022-06-13 Trung Le , Eli Shlizerman

Neural decoding may be formulated as dynamic state estimation (filtering) based on point process observations, a generally intractable problem. Numerical sampling techniques are often practically useful for the decoding of real neural data.…

神经元与认知 · 定量生物学 2019-01-15 Yuval Harel , Ron Meir , Manfred Opper

The activity of neurons within brain circuits has been ubiquitously reported to be correlated. The impact of these correlations on brain function has been extensively investigated. Correlations can in principle increase or decrease the…

神经元与认知 · 定量生物学 2025-07-24 Miguel Ibáñez-Berganza , Giulio Bondanelli , Stefano Panzeri

The principle of maximum entropy provides a useful method for inferring statistical mechanics models from observations in correlated systems, and is widely used in a variety of fields where accurate data are available. While the assumptions…

神经元与认知 · 定量生物学 2017-06-02 Ulisse Ferrari , Tomoyuki Obuchi , Thierry Mora
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