中文
相关论文

相关论文: Quantitative prediction of the phase diagram of DN…

200 篇论文

We present a quantitative, multi-scale coarse-grained model of DNA coated colloids. The parameters of this model are transferable and are solely based on experimental data. As a test case, we focus on nano-sized colloids carrying…

DNA-functionalized particles have great potential for the design of complex self-assembled materials. The major hurdle in realizing crystal structures from DNA-functionalized particles is expected to be kinetic barriers that trap the system…

软凝聚态物质 · 物理学 2015-03-06 Yajun Ding , Jeetain Mittal

The possibility of prescribing local interactions between nano- and microscopic components that direct them to assemble in a predictable fashion is a central goal of nanotechnology research. In this article we advance a new paradigm in…

We propose a model that can account for the experimentally observed phase behavior of DNA-nanoparticle assemblies (R. Jin et al., JACS 125, 1643 (2003); T. A. Taton et al., Science 289, 1757 (2000)). The binding of DNA-coated nano-particles…

软凝聚态物质 · 物理学 2007-05-23 D. B. Lukatsky , Daan Frenkel

We propose a new strategy to improve the self-assembly properties of DNA-functionalised colloids. The problem that we address is that DNA-functionalised colloids typically crystallize in a narrow temperature window, if at all. The…

软凝聚态物质 · 物理学 2013-01-22 B. M. Mognetti , M. E. Leunissen , D. Frenkel

DNA-coated colloids can self-assemble into an incredible diversity of crystal structures, but applications of this technology are limited by poor understanding and control over the dynamical crystallization pathways. To address this…

软凝聚态物质 · 物理学 2021-06-01 Alexander Hensley , William M. Jacobs , W. Benjamin Rogers

DNA is an astonishing material that can be used as a molecular building block to construct periodic arrays and devices with nanoscale accuracy and precision. Here, we present simple bead-spring model of DNA nanostars having three, four and…

软凝聚态物质 · 物理学 2021-10-22 Supriyo Naskar , Dhiraj Bhatia , Shiang-Tai Lin , Prabal K. Maiti

We introduce a coarse-grained model of DNA with bases modeled as rigid-body ellipsoids to capture their anisotropic stereochemistry. Interaction potentials are all physicochemical and generated from all-atom simulation/parameterization with…

软凝聚态物质 · 物理学 2015-05-14 Alex Morriss-Andrews , Joerg Rottler , Steven S. Plotkin

We present direct evidence for a reversible phase transition of DNA-linked colloidal gold assemblies. Transmission electron microscopy and optical absorption spectroscopy are used to monitor the colloidal gold phase transition, whose…

生物物理 · 物理学 2007-05-23 Young Sun , Nolan C. Harris , Ching-Hwa Kiang

The self-assembly of DNA-coated colloids into highly-ordered structures offers great promise for advanced optical materials. However, control of disorder, defects, melting, and crystal growth is hindered by the lack of a microscopic…

软凝聚态物质 · 物理学 2022-05-18 Fan Cui , Sophie Marbach , Jeana Aojie Zheng , Miranda Holmes-Cerfon , David J. Pine

DNA is now firmly established as a versatile and robust platform for achieving synthetic nanostructures. While the folding of single molecules into complex structures is routinely achieved through engineering basepair sequences, much less…

软凝聚态物质 · 物理学 2025-05-15 Soumen De Karmakar , Thomas Speck

Colloidal particles grafted with single-stranded DNA (ssDNA) chains can self-assemble into a number of different crystalline structures, where hybridization of the ssDNA chains creates links between colloids stabilizing their structure.…

软凝聚态物质 · 物理学 2015-06-17 Panagiotis E. Theodorakis , Nikolaos G. Fytas , Gerhard Kahl , Christoph Dellago

We evaluate, by means of molecular dynamics simulations employing a realistic DNA coarse-grained model, the phase behaviour and the structural and dynamic properties of tetravalent DNA nanostars, i.e. nanoconstructs completely made of DNA.…

软凝聚态物质 · 物理学 2014-10-01 Lorenzo Rovigatti , Francesca Bomboi , Francesco Sciortino

We present a phase-field model based on the Cahn-Hilliard equation to investigate the properties of phase separation in DNA nanostar systems. Leveraging a realistic free-energy functional derived from Wertheim theory, our model captures the…

软凝聚态物质 · 物理学 2025-04-23 Marco Cappa , Francesco Sciortino , Lorenzo Rovigatti

To characterize the thermodynamical equilibrium of DNA chains interacting with a solution of non-specific binding proteins, a Flory-Huggins free energy model was implemented. We explored the dependence on DNA and protein concentrations of…

软凝聚态物质 · 物理学 2015-11-04 Guillaume Le Treut , François Képès , Henri Orland

DNA-coated colloids can crystallize into a multitude of lattices, ranging from face-centered cubic to diamond and thereby contribute to our understanding of crystallization and open avenues to producing structures with useful photonic…

软凝聚态物质 · 物理学 2026-04-17 Pepijn G. Moerman , Huang Fang , Thomas E. Videbæk , W. Benjamin Rogers , Rebecca Schulman

We construct a theoretical model for the dynamics of a microscale colloidal particle, modeled as an interval, moving horizontally on a DNA-coated surface, modelled as a line coated with springs that can stick to the interval. Averaging over…

软凝聚态物质 · 物理学 2018-09-28 James P. Lee-Thorp , Miranda Holmes-Cerfon

DNA-coated colloids are a popular model system for self-assembly through tunable interactions. The DNA-encoded linkages between particles theoretically allow for very high specificity, but generally no directionality or long-range…

软凝聚态物质 · 物理学 2010-08-24 Simon H. Tindemans , Bela M. Mulder

In recent years significant attention has been attracted to proposals which utilize DNA for nanotechnological applications. Potential applications of these ideas range from the programmable self-assembly of colloidal crystals, to biosensors…

软凝聚态物质 · 物理学 2008-05-02 Nicholas A. Licata

The proper design of DNA sequences allows for the formation of well defined supramolecular units with controlled interactions via a consecution of self-assembling processes. Here, we benefit from the controlled DNA self-assembly to…

软凝聚态物质 · 物理学 2018-02-14 Javier Fernandez-Castanon , Francesca Bomboi , Francesco Sciortino
‹ 上一页 1 2 3 10 下一页 ›