中文
相关论文

相关论文: Role of anisotropy for protein-protein encounter

200 篇论文

The loading of a granular material induces anisotropies of the particle arrangement (fabric) and of the material's strength, incremental stiffness, and permeability. Thirteen measures of fabric anisotropy are developed, which are arranged…

软凝聚态物质 · 物理学 2018-12-21 Matthew R. Kuhn , WaiChing Sun , Qi Wang

The presence of nuclear pasta is expected to modify the transport properties in the mantle of neutron stars. The non-spherical geometry of the pasta nuclear clusters leads to anisotropies in the collision frequencies, impacting the thermal…

Using analytical calculations and computer simulations we consider both the lateral diffusion of a membrane protein and the fluctuation spectrum of the membrane in which the protein is embedded. The membrane protein interacts with the…

软凝聚态物质 · 物理学 2015-05-18 Ellen Reister-Gottfried , Stefan M. Leitenberger , Udo Seifert

The behaviour and stability of soft and biological matter depend significantly on electrostatic interactions, as particles such as proteins and colloids acquire a charge when dispersed in an electrolytic solution. A typical simplification…

软凝聚态物质 · 物理学 2025-05-09 Andraž Gnidovec , Emanuele Locatelli , Simon Čopar , Anže Božič , Emanuela Bianchi

We consider the lateral diffusion of a protein interacting with the curvature of the membrane. The interaction energy is minimized if the particle is at a membrane position with a certain curvature that agrees with the spontaneous curvature…

软凝聚态物质 · 物理学 2008-12-10 Stefan M. Leitenberger , Ellen Reister-Gottfried , Udo Seifert

Crowded environments modify the diffusion of macromolecules, generally slowing their movement and inducing transient anomalous subdiffusion. The presence of obstacles also modifies the kinetics and equilibrium behavior of tracers. While…

The effect of the anisotropy in the exchange interaction on the phase diagrams and magnetization behavior of the Heisenberg thin film has been investigated with effective field formulation in a two spin cluster using the decoupling…

统计力学 · 物理学 2015-06-17 Ümit Akıncı

Particle stabilized emulsions have received an enormous interest in the recent past, but our understanding of the dynamics of emulsion formation is still limited. For simple spherical particles, the time dependent growth of fluid domains is…

软凝聚态物质 · 物理学 2015-02-10 Florian Günther , Stefan Frijters , Jens Harting

In this paper, we develop an encounter-based model of partial surface adsorption for fractional diffusion in a bounded domain. We take the probability of adsorption to depend on the amount of particle-surface contact time, as specified by a…

统计力学 · 物理学 2023-03-21 Paul C Bressloff

The bulk dynamics of dense granular materials arise through a combination of particle-scale and mesoscale effects. Theoretical and numerical studies have shown that collective effects are created by particle-scale anisotropic structures…

软凝聚态物质 · 物理学 2024-09-25 Carmen L. Lee , Ephraim Bililign , Emilien Azéma , Karen E. Daniels

A two-dimensional fracture model where the interaction among elements is modeled by an anisotropic stress-transfer function is presented. The influence of anisotropy on the macroscopic properties of the samples is clarified, by…

统计力学 · 物理学 2008-02-22 R. C. Hidalgo , S. Zapperi , H. J. Herrmann

We analytically investigate the dynamic behavior of an an-isotropic active Brownian particle under various stochastic resetting protocols in two dimensions. The motion of shape-asymmetric active Brownian particles in two dimensions leads to…

统计力学 · 物理学 2025-11-26 Anirban Ghosh , Sudipta Mandal , Subhasish Chaki

We present a thermodynamically consistent mesoscopic model of protein adsorption at liquid-solid interfaces. First describing the equilibrium state under varying protein concentration of the solution and binding conditions, we predict a…

软凝聚态物质 · 物理学 2016-08-31 Gergely J. Szollosi , Imre Derenyi , Janos Voros

Total (elastic + rotationally inelastic) integral cross sections are computed for O$_2(^3\Sigma_g^-)$-O$_2(^3\Sigma_g^-)$ using a recent ab initio potential energy surface. The sampled velocity range allows us a thorough comparison of the…

Tracer particles immersed in suspensions of biological microswimmers such as E. coli or C. reinhardtii display phenomena unseen in conventional equilibrium systems, including strongly enhanced diffusivity relative to the Brownian value and…

软凝聚态物质 · 物理学 2022-01-27 Henrik Nordanger , Alexander Morozov , Joakim Stenhammar

Protein-protein binding enables orderly and lawful biological self-organization, and is therefore considered a miracle of nature. Protein-protein binding is steered by electrostatic forces, hydrogen bonding, van der Waals force, and…

生物大分子 · 定量生物学 2022-02-23 Lin Yang , Shuai Guo , Chengyu Hou , Chencheng Liao , Jiacheng Li , Liping Shi , Xiaoliang Ma , Shenda Jiang , Bing Zheng , Yi Fang , Lin Ye , Xiaodong He

It is known that compaction of granular matter can lead to anisotropic mechanical properties. Recent work has confirmed the link to pore space anisotropy, but the relation between compression, mechanical properties and material…

光学 · 物理学 2012-04-11 Erik Alerstam , Tomas Svensson

For a broad class of random walks with anisotropic scattering kernel and absorption, we derive explicit formulas that allow expressing the moments of the collision number $n_V$ performed in a volume $V$ as a function of the particle…

统计力学 · 物理学 2012-01-09 Andrea Zoia , Eric Dumonteil , Alain Mazzolo

Cellular membranes exhibit a large variety of shapes, strongly coupled to their function. Many biological processes involve dynamic reshaping of membranes, usually mediated by proteins. This interaction works both ways: while proteins…

软凝聚态物质 · 物理学 2018-06-12 Afshin Vahid , Anđela Šarić , Timon Idema

True contact between randomly rough solids consists of myriad individual micro-junctions. While their total area controls the adhesive friction force of the interface, other macroscopic features, including viscoelastic friction, wear,…

软凝聚态物质 · 物理学 2019-06-10 R. Sahli , G. Pallares , A. Papangelo , M. Ciavarella , C. Ducottet , N. Ponthus , J. Scheibert