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Bioconvection is the prototypical active matter system for hydrodynamic instabilities and pattern formation in suspensions of biased swimming microorganisms, particularly at the dilute end of the concentration spectrum where cell-cell…

软凝聚态物质 · 物理学 2025-01-22 Martin A. Bees , Prasad Perlekar

The survival of many microorganisms, like \textit{Leptospira} or \textit{Spiroplasma} bacteria, can depend on their ability to navigate towards regions of favorable viscosity. While this ability, called viscotaxis, has been observed in…

软凝聚态物质 · 物理学 2018-05-23 Benno Liebchen , Paul Monderkamp , Borge ten Hagen , Hartmut Löwen

Flagellated bacteria are hydrodynamically attracted to rigid walls, yet past work shows a 'hovering' state where they swim stably at a finite height above surfaces. We use numerics and theory to reveal the physical origin of hovering.…

生物物理 · 物理学 2024-09-17 Pyae Hein Htet , Debasish Das , Eric Lauga

Biofilms are spatially organized microorganism colonies embedded in a self-produced matrix, conferring to the microbial community resistance to environmental stresses. Motile bacteria have been observed swimming in the matrix of pathogenic…

定量方法 · 定量生物学 2022-05-24 Guillaume Ravel , Michel Bergmann , Alain Trubuil , Julien Deschamps , Romain Briandet , Simon Labarthe

Active matter comprises individually driven units that convert locally stored energy into mechanical motion. Interactions between driven units lead to a variety of non-equilibrium collective phenomena in active matter. One of such phenomena…

软凝聚态物质 · 物理学 2021-06-15 Mingji Huang , Wensi Hu , Siyuan Yang , Quan-Xing Liu , H. P. Zhang

Some microorganisms, such as spermatozoa, synchronize their flagella when swimming in close proximity. Using a simplified model (two infinite, parallel, two-dimensional waving sheets), we show that phase-locking arises from hydrodynamics…

生物物理 · 物理学 2009-09-15 Gwynn J. Elfring , Eric Lauga

The effect of the rigid top surface on the onset of phototactic bioconvection is investigated using linear stability theory for a suspension of forward-scattering phototactic algae in this article. The suspension is uniformly illuminated by…

动力系统 · 数学 2023-04-11 S. K. Rajput

Suspensions of motile microorganisms can spontaneously form large-scale fluid motion, known as bioconvection, characterized by dense downwelling plumes separated by broad upwelling regions. In this study, we investigate bioconvection in…

流体动力学 · 物理学 2025-07-01 S. Gore , I. Gholami , S. O. Ahmed , T. Doskhozhina , S. V. R. Ambadipudi , A. J. Bae , A. Gholami

The existence of temperature gradients within eukaryotic cells has been postulated as a source of natural convection in the cytoplasm, i.e. bulk fluid motion as a result of temperature-difference-induced density gradients. Recent…

流体动力学 · 物理学 2024-07-22 Nikhil Desai , Weida Liao , Eric Lauga

One of the characteristic features of many marine dinoflagellates is their bioluminescence, which lights up nighttime breaking waves or seawater sliced by a ship's prow. While the internal biochemistry of light production by these…

Enhancing the efficiency of water electrolysis, which can be severely impacted by the nucleation and growth of bubbles, is key in the energy transition. In this combined experimental and numerical study, in-situ bubble evolution and…

Phototaxis is an important reaction to light displayed by a wide range of motile microorganisms. Flagellated eukaryotic microalgae in particular, like the model organism Chlamydomonas reinhardtii, steer either towards or away from light by…

细胞行为 · 定量生物学 2016-11-28 Jorge Arrieta , Ana Barreira , Maurizio Chioccioli , Marco Polin , Idan Tuval

When a drop of a volatile liquid is deposited on a uniformly heated wettable, thermally conducting substrate, one expects to see it spread into a thin film and evaporate. Contrary to this intuition, due to thermal Marangoni contraction the…

流体动力学 · 物理学 2023-06-21 Pallav Kant , Mathieu Souzy , Nayoung Kim , Devaraj van der Meer , Detlef Lohse

Fluids subject to both thermal and compositional variations can undergo doubly diffusive convection when these properties both affect the fluid density and diffuse at different rates. In natural doubly diffusive convection, the gradients of…

流体动力学 · 物理学 2026-02-10 J. Tumelty , C. Beaume , A. M. Rucklidge

E. coli bacteria swim following a run and tumble pattern. In the run state all flagella join in a single helical bundle that propels the cell body along approximately straight paths. When one or more flagellar motors reverse direction the…

软凝聚态物质 · 物理学 2015-07-01 S. Bianchi , F. Saglimbeni , A. Lepore , R. Di Leonardo

Bacterial colonies are a well-known example of living active matter, exhibiting collective behaviors such as nematic alignment and collective motion that play an important role in the spread of microbial infections. While the underlying…

In Nature there are significant relationships known between microorganisms from two kingdoms of life, as in the supply of vitamin B$_{12}$ by bacteria to algae. Such interactions motivate general investigations into the spatio-temporal…

软凝聚态物质 · 物理学 2023-12-14 Praneet Prakash , Yasa Baig , Francois J. Peaudecerf , Raymond E. Goldstein

Biofilms are microbial collectives that occupy a diverse array of surfaces. The function and evolution of biofilms are strongly influenced by the spatial arrangement of different strains and species within them, but how spatiotemporal…

种群与进化 · 定量生物学 2018-07-04 Ricardo Martinez-Garcia , Carey D. Nadell , Raimo Hartmann , Knut Drescher , Juan A. Bonachela

Thermal convection is observed in molecular dynamic simulation of a fluidized granular system of nearly elastic hard disks moving under gravity, inside a rectangular box. Boundaries introduce no shearing or time dependence, but the energy…

统计力学 · 物理学 2009-10-31 Rosa Ramirez , Dino Risso , Patricio Cordero

Thermal light sources can produce photons with strong spatial correlations. We study the role that these correlations might potentially play in bacterial photosynthesis. Our findings show a relationship between the transversal distance…