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Antibiotics are the wonder discoveries to combat microbes. For decades, multiple varieties of antibiotics have been used for therapeutic purposes in hospital settings and communities throughout the world. Unfortunately, bacteria have become…

其他定量生物学 · 定量生物学 2019-08-13 Fazlul MKK , Shah Samiur Rashid , Nazmul MHM , Zaidul I. S. M , Roesnita Baharudin , Aizi Nor Mazila Ramli

Virus binding to a surface results at least locally, at the contact area, in stress and potential structural perturbation of the virus cage. Here we address the question of the role of substrate-induced deformation in the overall virus…

定量方法 · 定量生物学 2017-07-26 Cheng Zeng , Mercedes Hernando-Pérez , Xiang Ma , Paul van der Schoot , Roya Zandi , Bogdan Dragnea

Antimicrobial-resistant (AMR) microbes are a growing challenge in healthcare, rendering modern medicines ineffective. AMR arises from antibiotic production and bacterial evolution, but quantifying its transmission remains difficult. With…

机器学习 · 计算机科学 2025-02-04 Qian Fu , Yuzhe Zhang , Yanfeng Shu , Ming Ding , Lina Yao , Chen Wang

Bacterial heterogeneity is pivotal for adaptation to diverse environments, posing significant challenges in microbial diagnostics and therapeutic interventions. Recent advancements in high-resolution optical microscopy have revolutionized…

Development of the new antimicrobial agents against antibiotic resistance pathogens is the nowadays challenge. Antimicrobial peptides (AMP) occur as important defence agents in many organisms and offer a viable alternative to conventional…

生物大分子 · 定量生物学 2013-07-24 M. Pirtskhalava , B. Vishnepolsky , M. Grigolava

Wettability is a fundamental physicochemical property of solid surfaces, with unique wettability patterns playing pivotal roles across diverse domains. Inspired by nature's ingenious designs, bio-inspired materials have emerged as a…

生物物理 · 物理学 2024-04-19 Fan Meng , Noriyoshi Arai

Supported Lipid Bilayers (SLBs) are model membranes formed at solid substrate surfaces. This architecture renders the membrane experimentally accessible to surface sensitive techniques used to study their properties, including Atomic Force…

生物物理 · 物理学 2019-11-19 James A. Goodchild , Danielle L. Walsh , Simon D. Connell

The presence of bacterial biofilms in clinical and industrial settings is a major issue worldwide. A biofilm is a viscoelastic matrix, composed of bacteria producing a network of Extracellular Polymeric Substances (EPS) to which bacteria…

Biocomputing systems based on engineered bacteria can lead to novel tools for environmental monitoring and detection of metabolic diseases. In this paper, we propose a Bacterial Molecular Computing on a Chip (BMCoC) using microfluidic and…

While the mechanisms and quantitative details are complex, few analysts would doubt that antibiotic use increases the prevalence of drug-resistant bacterial pathogens among all bacteria causing disease in a population. The causal connection…

种群与进化 · 定量生物学 2018-03-21 Edward Goldstein , Derek R. MacFadden , Marc Lipsitch

Microbes are everywhere, including in and on our bodies, and have been shown to play key roles in a variety of prevalent human diseases. Consequently, there has been intense interest in the design of bacteriotherapies or "bugs as drugs,"…

机器学习 · 统计学 2020-04-13 Travis E. Gibson , Georg K. Gerber

Pathogenic Gram-negative bacteria have developed resistance to antibiotics due to their ability in creating an envelope on the outer layer of lipooligosaccharides (LOS). The cationic phosphoethanolamine (PEA) decoration of LOS lipid A is…

生物大分子 · 定量生物学 2018-03-14 Abi Sofyan Ghifari

Bone regeneration is a clinical challenge that requires multiple approaches. Sometimes, it also includes the development of new osteogenic and antibacterial biomaterials to treat the occurrence of possible infection processes derived from…

定量方法 · 定量生物学 2021-03-24 C. Heras , J. Jimenez Holguin , A. L. Doadrio , M. Vallet-Regi , S. Sanchez-Salcedo , A. J. Salinas

Bacteria pose unique challenges for genome-wide association studies (GWAS) because of strong structuring into distinct strains and substantial linkage disequilibrium across the genome. While methods developed for human studies can correct…

Predicting the binding free energy between antibodies and antigens is a key challenge in structure-aware biomolecular modeling, with direct implications for antibody design. Most existing methods either rely solely on sequence embeddings or…

生物大分子 · 定量生物学 2025-08-28 Ciyuan Yu , Hongzong Li , Jiahao Ma , Shiqin Tang , Ye-Fan Hu , Jian-Dong Huang

Biomimetic membranes in contact with a planar substrate or a second membrane are studied theoretically. The membranes contain specific adhesion molecules (stickers) which are attracted by the second surface. In the absence of stickers, the…

软凝聚态物质 · 物理学 2016-08-31 Thomas R. Weikl , David Andelman , Shigeyuki Komura , Reinhard Lipowsky

Multiplexed, specific and sensitive detection of antigens is critical for the rapid and accurate diagnosis of disease and the informed development of personalized treatment plans. Here, we show that polymer microsphere lasers can be used as…

Bayesian network models are finding success in characterizing enzyme-catalyzed reactions, slow conformational changes, predicting enzyme inhibition, and genomics. In this work, we apply them to statistical modeling of peptides by…

应用统计 · 统计学 2018-10-09 Rainier Barrett , Shaoyi Jiang , Andrew D White

Present study is dedicated to the problem of electrochemical analysis of multicomponent mixtures such as milk. A combination of cyclic voltammetry facilities and machine learning technique made it possible to create a pattern recognition…

Dynamical response of nanomechanical cantilever structures immersed in a viscous fluid is important to in vitro single-molecule force spectroscopy, biomolecular recognition of disease-specific proteins, and the detection of microscopic…

其他凝聚态物理 · 物理学 2009-11-11 Jerome Dorignac , Agnieszka Kalinowski , Shyamsunder Erramilli , Pritiraj Mohanty