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Bead spring models for polymers in solution are nonlinear if either the finite extensibility of the polymer, excluded volume effects or hydrodynamic interactions between polymer segments are taken into account. For such models we use a…

软凝聚态物质 · 物理学 2009-11-07 Roland Rzehak , Walter Zimmermann

We present a novel method to investigate the dynamics of a single semiflexible polymer, subject to anisotropic friction in a viscous fluid. In contrast to previous approaches, we do not rely on a discrete bead-rod model, but introduce a…

生物大分子 · 定量生物学 2009-11-13 Tobias Munk , Oskar Hallatschek , Chris H. Wiggins , Erwin Frey

Solutions of semiflexible polymers confined by repulsive planar walls are studied by density functional theory and Molecular Dynamics simulations, to clarify the competition between the chain alignment favored by the wall and the depletion…

软凝聚态物质 · 物理学 2016-05-25 Sergei A. Egorov , Andrey Milchev , Peter Virnau , Kurt Binder

The properties of a semiflexible polymer with fixed ends exposed to oscillatory shear flow are investigated by simulations. The two-dimensionally confined polymer is modeled as a linear bead-spring chain, and the interaction with the fluid…

软凝聚态物质 · 物理学 2021-12-14 Antonio Lamura , Roland G. Winkler

The non-linear response of entangled polymers to shear flow is complicated. Its current understanding is framed mainly as a rheological description in terms of the complex viscosity. However, the full picture requires an assessment of the…

计算物理 · 物理学 2018-08-21 Airidas Korolkovas , Philipp Gutfreund , Max Wolff

The linear viscoelastic response of flexible polymer solutions in the dilute and semidilute unentangled regimes is investigated using Brownian dynamics simulations. The relaxation modulus and dynamic moduli are computed over a wide range of…

软凝聚态物质 · 物理学 2026-04-08 Amit Varakhedkar , P. Sunthar , J. Ravi Prakash

Recent experiments have demonstrated that the nonlinear elasticity of in vitro networks of the biopolymer actin is dramatically altered in the presence of a flexible cross-linker such as the abundant cytoskeletal protein filamin. The basic…

软凝聚态物质 · 物理学 2015-05-13 C. P. Broedersz , C. Storm , F. C. MacKintosh

We study the mechanical stiffening behavior in two-dimensional (2D) cross-linked networks of semiflexible biopolymer filaments under simple shear. Filamental constituents immersed in a fluid undergo thermally excited bending motions.…

生物物理 · 物理学 2007-05-23 T. Van Dillen , P. R. Onck , E. Van der Giessen

We review the experimental and theoretical results obtained during the past decade on the structure and rheology of wormlike micellar solutions. We focus on the linear and nonlinear viscoelasticity and emphasize the analogies with polymers.…

软凝聚态物质 · 物理学 2021-09-27 Jean-Francois Berret

Entangled networks of stiff biopolymers exhibit complex dynamic response, emerging from the topological constraints that neighboring filaments impose upon each other. We propose a class of reference models for entanglement dynamics of stiff…

软凝聚态物质 · 物理学 2008-06-23 Felix Höfling , Tobias Munk , Erwin Frey , Thomas Franosch

The nonequilibrium structural and dynamical properties of semiflexible active polar polymers subject to linear flow are studied by numerical simulations. Filaments are confined in two dimensions and immersed in a fluid described by the…

软凝聚态物质 · 物理学 2026-04-23 A. Lamura , R. G. Winkler

We briefly review the recent advances in the rheology of entangled polymers and identify emerging research trends and outstanding challenges, especially with respect to branched polymers. Emphasis is placed on the role of well-characterized…

软凝聚态物质 · 物理学 2016-04-12 F. Snijkers , R. Pasquino , P. D. Olmsted , D. Vlassopoulos

Filamentous bio-materials such as fibrin or collagen networks exhibit an enormous stiffening of their elastic moduli upon large deformations. This pronounced nonlinear behavior stems from a significant separation between the stiffnesses…

软凝聚态物质 · 物理学 2019-05-21 Robbie Rens , Carlos Villarroel , Gustavo Düring , Edan Lerner

We present a Landau type theory for the non-linear elasticity of biopolymer gels with a part of the order parameter describing induced nematic order of fibers in the gel. We attribute the non-linear elastic behavior of these materials to…

软凝聚态物质 · 物理学 2015-06-18 Jingchen Feng , Herbert Levine , Xiaoming Mao , Leonard M. Sander

Brownian dynamics simulations are used to study highly entangled solutions of semiflexible polymers. Bending fluctuations of semiflexible rods are signficantly affected by entanglement only above a concentration $c^{**}$, where $c^{**}\sim…

软凝聚态物质 · 物理学 2009-11-13 Shriram Ramanathan , David C Morse

Reptation theory has been highly successful in explaining the unusual material properties of entangled polymer solutions. It reduces the complex many-body dynamics to a single-polymer description where each polymer is envisaged to be…

软凝聚态物质 · 物理学 2018-02-13 Philipp Lang , Erwin Frey

Disordered networks of semiflexible filaments are common support structures in biology. Familiar examples include fibrous matrices in blood clots, bacterial biofilms, and essential components of cells and tissues of plants, animals, and…

软凝聚态物质 · 物理学 2023-09-28 Saamiya Syed , Fred C. MacKintosh , Jordan L. Shivers

We develop a model for gels and entangled solutions of semiflexible biopolymers such as F-actin. Such networks play a crucial structural role in the cytoskeleton of cells. We show that the rheologic properties of these networks can result…

凝聚态物理 · 物理学 2009-10-28 F. C. MacKintosh , J. Kas , P. A. Janmey

Morphogenesis depends crucially on the complex rheological properties of cell tissues and on their ability to maintain mechanical integrity while rearranging at long times. In this paper, we study the rheology of polygonal cellular networks…

软凝聚态物质 · 物理学 2021-03-31 Charlie Duclut , Joris Paijmans , Mandar M. Inamdar , Carl D. Modes , Frank Jülicher

The properties of semidilute polymer solutions are investigated at equilibrium and under shear flow by mesoscale simulations, which combine molecular dynamics simulations and the multiparticle collision dynamics approach. In semidilute…

软凝聚态物质 · 物理学 2015-03-19 Chien-Cheng Huang , Roland G. Winkler , Godehard Sutmann , Gerhard Gompper
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