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Properties of transport of molecular motors are investigated. A simplified model based on the concept of Brownian ratchets is applied. We analyze a stochastic equation of motion by means of numerical methods. The transport is systematically…

统计力学 · 物理学 2011-12-07 Lukasz Machura , Marcin Kostur , Jerzy Luczka

Transport phenomena in complex and dynamic microscopic environments are fundamentally shaped by hydrodynamic interactions. In particular, microparticle transport in porous media is governed by the delicate interplay between…

Anomalously slow passive diffusion, $\langle \delta x^2(t)\rangle\simeq t^{\alpha}$, with $0<\alpha<1$, of larger tracers such as messenger RNA and endogenous submicron granules in the cytoplasm of living biological cells has been…

生物物理 · 物理学 2014-09-24 Igor Goychuk , Vasyl O. Kharchenko , Ralf Metzler

Individual processive molecular motors, of which conventional kinesin is the most studied quantitatively, move along polar molecular tracks and, by exerting a force ${\bm F} = (F_x,F_y,F_z)$ on a tether, drag cellular cargoes, {\em in…

统计力学 · 物理学 2015-06-25 Young C. Kim , Michael E. Fisher

Micron-sized self-propelled (active) particles can be considered as model systems for characterizing more complex biological organisms like swimming bacteria or motile cells. We produce asymmetric microswimmers by soft lithography and study…

Granular materials are inherently out-of-equilibrium systems due to energy dissipation through inelastic collisions and friction. When driven by mechanical agitation such as vibration, they exhibit rich collective behaviors including…

软凝聚态物质 · 物理学 2026-05-01 Kai Kono , Hiroyuki Ebata , Shio Inagaki

A particle on a substrate supporting a surface acoustic wave can experience horizontal drift excited by the dry friction force. The effect is referred to as vibrational transportation, or as a surface acoustic wave motor. A traditional…

应用物理 · 物理学 2025-11-27 Marina E. Terzi , Vladislav V. Aleshin , Jules Ghesqui`ere , Vincent Tournat

Collective cell migration is a key driver of embryonic development, wound healing, and some types of cancer invasion. Here we provide a physical perspective of the mechanisms underlying collective cell migration. We begin with a catalogue…

生物物理 · 物理学 2019-10-08 Ricard Alert , Xavier Trepat

We study the drift of suspended micro-particles in a viscous liquid pumped back and forth through a periodic lattice of pores (drift ratchet). In order to explain the particle drift observed in such an experiment, we present an…

流体动力学 · 物理学 2012-05-22 Philippe Beltrame , Peter Talkner , Peter Hänggi

Within living cells, the transport of cargo is accomplished by groups of molecular motors. Such collective transport could utilize mechanisms which emerge from inter-motor interactions in ways that are yet to be fully understood. Here we…

生物大分子 · 定量生物学 2016-10-04 David Ando , Michelle K. Mattson , Jing Xu , Ajay Gopinathan

By event-driven molecular dynamics simulations we investigate magneto-transport in a two-dimensional model with randomly distributed scatterers close to the field-induced localization transition. This transition is generated by percolating…

介观与纳米尺度物理 · 物理学 2015-12-14 Walter Schirmacher , Benedikt Fuchs , Felix Höfling , Thomas Franosch

Charge migration is a ubiquitous phenomenon with profound implications throughout many areas of chemistry, physics, biology and materials science. The long-term vision of designing functional materials with tailored molecular scale…

材料科学 · 物理学 2012-01-24 C. Gollub , S. Avdoshenko , R. Gutierrez , Y. Berlin , G. Cuniberti

We analyse collective motion that occurs during rare (large deviation) events in systems of active particles, both numerically and analytically. We discuss the associated dynamical phase transition to collective motion, which occurs when…

Molecular motors do not work in isolation {\it in-vivo}. We highlight some of the coordinations, cooperations and competitions that determine the collective properties of molecular motors in eukaryotic cells. In the context of traffic-like…

生物物理 · 物理学 2009-04-16 Debashish Chowdhury

While the collective motion of active particles has been studied extensively, effective strategies to navigate particle swarms without external guidance remain elusive. We introduce a method to control the trajectories of two-dimensional…

软凝聚态物质 · 物理学 2023-08-28 Sophie Y. Lee , Philipp W. A. Schönhöfer , Sharon C. Glotzer

We numerically examine the driven transport of an overdamped self-propelled particle through a two-dimensional array of circular obstacles. A detailed analysis of transport quantifiers (mobility and diffusivity) has been performed for two…

软凝聚态物质 · 物理学 2023-10-16 Shubhadip Nayak , Sohom Das , Poulami Bag , Tanwi Debnath , Pulak K. Ghosh

Mixing and transport of passive particles are studied in a simple kinematic model of a meandering jet flow motivated by the problem of lateral mixing and transport in the Gulf Stream. We briefly discuss a model streamfunction, Hamiltonian…

混沌动力学 · 物理学 2012-05-29 S. V. Prants , M. V. Budyansky , M. Yu. Uleysky , G. M. Zaslavsky

Particle transport through an open, discrete 1-D channel against a mechanical or chemical bias is analyzed within a master equation approach. The channel, externally driven by time dependent site energies, allows multiple occupation due to…

统计力学 · 物理学 2015-05-18 Mario Einax , Gemma Solomon , Wolfgang Dieterich , Abraham Nitzan

We scrutinize the temporally-resolved speed of active cargo transport in living cells, and show intermittent bursting motions. These nonlinear fluctuations follow a scaling law over several decades of time and space, the statistical…

亚细胞过程 · 定量生物学 2015-06-16 Bo Wang , James Kuo , Steve Granick

Transport of molecular motors along protein filaments in a half-closed geometry is a common feature of biologically relevant processes in cellular protrusions. Using a lattice gas model we study how the interplay between active and…

生物物理 · 物理学 2017-03-30 Isabella R. Graf , Erwin Frey