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The searching for the stable patterns in the evolution of cellular automata is implemented using stochastic synchronization between the present structures of the system and its precedent configurations. For most of the known evolution rules…

元胞自动机与格子气 · 物理学 2007-05-23 J. R. Sanchez , R. Lopez-Ruiz

We have previously presented the idea of how complex multimodal information could be represented in our brains in a compressed form, following mechanisms similar to those employed in machine learning tools, like autoencoders. In this short…

神经元与认知 · 定量生物学 2024-06-17 Jesus Marco de Lucas , Maria Peña Fernandez , Lara Lloret Iglesias

Suppressing charge recombination is key for organic solar cells to become commercial reality. However, there is still no conclusive picture of how recombination losses are influenced by the complex nanoscale morphology. Here, new insight is…

The spin activity in macromolecules such as DNA and oligopeptides, in the context of the Chiral Induced Spin Selectivity (CISS) has been proposed to be due to the atomic Spin-Orbit Coupling (SOC) and the associated chiral symmetry of the…

介观与纳米尺度物理 · 物理学 2021-10-22 Alexander López , Solmar Varela , Ernesto Medina

We investigate an attractive atomic Bose-Einstein condensate (BEC) trapped by a double-well potential in the axial direction and by a harmonic potential in the transverse directions. We obtain numerically, for the first time, a quantum…

量子气体 · 物理学 2011-01-04 Giovanni Mazzarella , Luca Salasnich

Recently the first chemical systems which show the amplification of enantiometric excess (ee) was found. Inspired by these experiments, we propose a few chemical reaction models in a closed system. The reactions consist of autocatalytic…

生物物理 · 物理学 2007-05-23 Yukio Saito , Hiroyuki Hyuga

The clogging behavior of a symmetric binary mixture of particles that are driven in opposite directions through constrictions is explored by Brownian dynamics simulations and theory. A dynamical state with a spontaneously broken symmetry…

软凝聚态物质 · 物理学 2016-12-28 Tobias Glanz , Raphael Wittkowski , Hartmut Löwen

Liquid-liquid phase separation has emerged as one of the important paradigms in the chemical physics as well as biophysics of charged macromolecular systems. We elucidate an equilibrium phase separation mechanism based on charge regulation,…

软凝聚态物质 · 物理学 2020-12-25 Arghya Majee , Markus Bier , Ralf Blossey , Rudolf Podgornik

It is widely believed that the folding of the chromosome in the nucleus has a major effect on genetic expression. For example co-regulated genes in several species have been shown to colocalize in space despite being far away on the DNA…

定量方法 · 定量生物学 2020-04-29 Guillaume Le Treut , François Képès , Henri Orland

A recently proposed model of non-autocatalytic reactions in dipeptide reactions leading to spontaneous symmetry breaking and homochirality is examined. The model is governed by activation, polymerization, epimerization and depolymerization…

生物大分子 · 定量生物学 2007-11-01 Axel Brandenburg , Harry J. Lehto , Kirsi M. Lehto

The ever-increasing number of genome sequencing and resequencing projects is a central source of insights into the ecology and evolution of non-model organisms. An important aspect of genomics is the elucidation of sex determination systems…

基因组学 · 定量生物学 2019-02-19 Ketil Malde , Rasmus Skern , Kevin A. Glover

We propose a mechanism of R-symmetry breaking in four-dimensional DSB models based on the RG properties of the coupling constants. By constraining the UV sector, we generate new hierarchies amongst the couplings that allow a spontaneously…

高能物理 - 理论 · 物理学 2013-04-08 Antonio Amariti , David Stone

Lateral inhibition patterns mediated by the Notch-Delta signaling system occur in diverse developmental contexts. These systems are based on an intercellular feedback loop in which Notch activation leads to down-regulation of Delta.…

分子网络 · 定量生物学 2010-05-25 Amit Lakhanpal , David Sprinzak , Michael B. Elowitz

Why does spontaneous symmetry breaking occur? Why is a state breaking symmetry realized? We explore an idea that measurement selects such a state even if a system is given in a state respecting the symmetry of the system. We point out that…

量子物理 · 物理学 2014-05-07 Takaaki Monnai , Mauro Iazzi , Kazuya Yuasa

We study a two component Bose-Einstein condensate in the presence of an inhomogeneous artificial gauge field. In response to this field, the condensate forms a localised vortex lattice structure that leads to a non-trivial symmetry breaking…

量子气体 · 物理学 2020-11-18 S. Sahar S. Hejazi , Juan Polo , Rashi Sachdeva , Thomas Busch

Recent studies of cancer somatic mutation profiles seek to identify mutations for targeted therapy in personalized medicine. Analysis of profiles, however, is not trivial, as each profile is heterogeneous and there are multiple confounding…

机器学习 · 统计学 2020-05-25 Rahul Mehta , Muge Karaman

By analyzing the spacing of genes on chromosomes, we find that transcriptional and RNA-processing regulatory sequences outside coding regions leave footprints on the distribution of intergenic distances. Using analogies between genes on…

基因组学 · 定量生物学 2008-03-11 Rutger Hermsen , Pieter Rein ten Wolde , Sarah Teichmann

Individual cancer cells carry a bewildering number of distinct genomic alterations i.e., copy number variations and mutations, making it a challenge to uncover genomic-driven mechanisms governing tumorigenesis. Here we performed…

The pattern of spontaneous chiral symmetry breaking (CSB) in confining background fields is analyzed. It is explicitly demonstrated how to get the inverse square root large proper time asymptotic of the operator product expansion which is…

高能物理 - 唯象学 · 物理学 2009-11-11 V. I. Shevchenko

We say that a Cellular Automata (CA) is coalescing when its execution on two distinct (random) initial configurations in the same asynchronous mode (the same cells are updated in each configuration at each time step) makes both…

元胞自动机与格子气 · 物理学 2007-12-13 Jean-Baptiste Rouquier , Michel Morvan