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相关论文: Adaptive Coevolutionary Networks: A Review

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We study a general set of models of social network evolution and dynamics. The models consist of both a dynamics on the network and evolution of the network. Links are formed preferentially between 'similar' nodes, where the similarity is…

物理与社会 · 物理学 2009-11-11 George C. M. A. Ehrhardt , Matteo Marsili , Fernando Vega-Redondo

Transport networks play a key role across four realms of eukaryotic life: slime molds, fungi, plants, and animals. In addition to the developmental algorithms that build them, many also employ adaptive strategies to respond to stimuli,…

适应与自组织系统 · 物理学 2014-06-02 Johannes Gräwer , Carl D. Modes , Marcelo O. Magnasco , Eleni Katifori

Rapid advances in high-throughput technologies have led to considerable interest in analyzing genome-scale data in the context of biological pathways, with the goal of identifying functional systems that are involved in a given phenotype.…

定量方法 · 定量生物学 2015-06-01 Rosemary Braun , Sahil Shah

Recent genomic and bioinformatic advances have motivated the development of numerous random network models purporting to describe graphs of biological, technological, and sociological origin. The success of a model has been evaluated by how…

Recently, motivated by the pioneer works that reveal the small-world effect and scale-free property of various real-life networks, many scientists devote themselves into studying complex networks. One of the ultimate goals is to understand…

物理与社会 · 物理学 2007-05-23 Tao Zhou , Zhong-Qian Fu , Bing-Hong Wang

In a complex system, the interactions between individual agents often lead to emergent collective behavior like spontaneous synchronization, swarming, and pattern formation. The topology of the network of interactions can have a dramatic…

适应与自组织系统 · 物理学 2022-07-25 Mark J Panaggio , Maria-Veronica Ciocanel , Lauren Lazarus , Chad M Topaz , Bin Xu

Links in a practical network may have different functions, which makes the original network a combination of some functional subnetworks. Here, by a model of coupled oscillators, we investigate how such functional subnetworks are evolved…

适应与自组织系统 · 物理学 2015-05-13 Menghui Li , Xingang Wang , Choy-Heng Lai

We analyze a model of interacting agents (e.g. prebiotic chemical species) which are represended by nodes of a network, whereas their interactions are mapped onto directed links between these nodes. On a fast time scale, each agent follows…

种群与进化 · 定量生物学 2009-11-13 Adrian M. Seufert , Frank Schweitzer

This paper considers the problem of detecting topology variations in dynamical networks. We consider a network whose behavior can be represented via a linear dynamical system. The problem of interest is then that of finding conditions under…

系统与控制 · 计算机科学 2015-04-17 G. Battistelli , P. Tesi

What can we learn from the collective dynamics of a complex network about its interaction topology? Taking the perspective from nonlinear dynamics, we briefly review recent progress on how to infer structural connectivity (direct…

适应与自组织系统 · 物理学 2014-08-14 Marc Timme , Jose Casadiego

Adaptive (or co-evolutionary) network dynamics, i.e., when changes of the network/graph topology are coupled with changes in the node/vertex dynamics, can give rise to rich and complex dynamical behavior. Even though adaptivity can improve…

动力系统 · 数学 2021-09-14 Marios Antonios Gkogkas , Christian Kuehn , Chuang Xu

Complex network theory aims to model and analyze complex systems that consist of multiple and interdependent components. Among all studies on complex networks, topological structure analysis is of the most fundamental importance, as it…

社会与信息网络 · 计算机科学 2010-09-15 Bo Yang , Jiming Liu

This chapter provides an overview of the different techniques and methods that exist for the analysis and visualization of dynamic networks. Basic definitions and formal notations are discussed and important references are cited. A major…

社会与信息网络 · 计算机科学 2014-09-18 Faraz Zaidi , Chris Muelder , Arnaud Sallaberry

The network paradigm is increasingly used to describe the topology and dynamics of complex systems. Here we review the results of the topological analysis of protein structures as molecular networks describing their small-world character,…

生物大分子 · 定量生物学 2007-06-10 Csaba Bode , Istvan A. Kovacs , Mate S. Szalay , Robin Palotai , Tamas Korcsmaros , Peter Csermely

The mutual influence of dynamics and structure is a central issue in complex systems. In this paper we study by simulation slow evolution of network under the feedback of a local-majority-rule opinion process. If performance-enhancing local…

物理与社会 · 物理学 2009-11-13 Zhen Shao , Haijun Zhou

The evolution of cooperation in networked systems helps to understand the dynamics in social networks, multi-agent systems, and biological species. The self-persistence of individual strategies is common in real-world decision making. The…

社会与信息网络 · 计算机科学 2025-11-25 Ziyan Zeng , Minyu Feng , Attila Szolnoki

A complexity-theoretic approach to studying biological networks is proposed. A simple graph representation is used where molecules (DNA, RNA, proteins and chemicals) are vertices and relations between them are directed and signed…

社会与信息网络 · 计算机科学 2018-04-25 Ali Atiia , François Major , Jérôme Waldispühl

Evolution has fascinated quantitative and physical scientists for decades: how can the random process of mutation, recombination, and duplication of genetic information generate the diversity of life? What determines the rate of evolution?…

种群与进化 · 定量生物学 2018-04-23 Richard A. Neher , Aleksandra M. Walczak

Networks observed in real world like social networks, collaboration networks etc., exhibit temporal dynamics, i.e. nodes and edges appear and/or disappear over time. In this paper, we propose a generative, latent space based, statistical…

社会与信息网络 · 计算机科学 2018-11-08 Shubham Gupta , Gaurav Sharma , Ambedkar Dukkipati

In social dilemmas, most interactions are transient and susceptible to restructuring, leading to continuous changes in social networks over time. Typically, agents assess the rewards of their current interactions and adjust their…

物理与社会 · 物理学 2025-11-25 Xiaojin Xiong , Yichao Yao , Minyu Feng , Manuel Chica