数据结构与算法

The minimizer of a word of size $k$ (a $k$-mer) is defined as its smallest substring of size $m$ (with $m\leq k$), according to some ordering on $m$-mers. minimizers have been used in bioinformatics -- notably -- to partition sequencing…

Clustering is a key task in machine learning, with $k$-means being widely used for its simplicity and effectiveness. While 1D clustering is common, existing methods often fail to exploit the structure of 1D data, leading to inefficiencies.…

The recent work of Kleinberg & Mullainathan [KM24] provides a concrete model for language generation in the limit: given a sequence of examples from an unknown target language, the goal is to generate new examples from the target language…

Connectivity (or equivalently, unweighted maximum flow) is an important measure in graph theory and combinatorial optimization. Given a graph $G$ with vertices $s$ and $t$, the connectivity $\lambda(s,t)$ from $s$ to $t$ is defined to be…

Many combinatorial optimization problems can be formulated as the search for a subgraph that satisfies certain properties and minimizes the total weight. We assume here that the vertices correspond to points in a metric space and can take…

A tree is said to be even if for every pair of distinct leaves, the length of the unique path between them is even. In this paper we discuss the problem of determining whether an input graph has a spanning even tree. Hofmann and Walsh…

In the realm of data stream processing, the advent of SET-INCREMENT Mixed (SIM) data streams necessitates algorithms that efficiently handle both SET and INCREMENT operations. We present Carbonyl4, an innovative algorithm designed…

Counting the number of $(p, q)$-bicliques (complete bipartite subgraphs) in a bipartite graph is a fundamental problem which plays a crucial role in numerous bipartite graph analysis applications. However, existing algorithms for counting…

This paper describes a novel method for efficiently calculating CRC checksums without lookup tables or hardware support for polynomial multiplication. Throughput of CRC32 is increased by 100% across different platforms compared with the…

In this paper, we present an improved approximation algorithm for three related problems. In the Minimum Sum of Radii clustering problem (MSR), we aim to select $k$ balls in a metric space to cover all points while minimizing the sum of the…

Online resource allocation is a rich and varied field. One of the most well-known problems in this area is online bipartite matching, introduced in 1990 by Karp, Vazirani, and Vazirani [KVV90]. Since then, many variants have been studied,…

Let $\mathsf{TH}_k$ denote the $k$-out-of-$n$ threshold function: given $n$ input Boolean variables, the output is $1$ if and only if at least $k$ of the inputs are $1$. We consider the problem of computing the $\mathsf{TH}_k$ function…

Stackless traversal is a technique to speed up range queries by avoiding usage of a stack during the tree traversal. One way to achieve that is to transform a given binary tree to store a left child and a skip-connection (also called an…

We study the algorithmic complexity of partitioning the vertex set of a given (di)graph into a small number of paths. The Path Partition problem (PP) has been studied extensively, as it includes Hamiltonian Path as a special case. The…

We study property testing with incomplete or noisy inputs. The models we consider allow for adversarial manipulation of the input, but differ in whether the manipulation can be done only offline, i.e., before the execution of the algorithm,…

A structural graph summary is a small graph representation that preserves structural information necessary for a given task. The summary is used instead of the original graph to complete the task faster. We introduce multi-view structural…

We study the problem of learning a hypergraph via edge detecting queries. In this problem, a learner queries subsets of vertices of a hidden hypergraph and observes whether these subsets contain an edge or not. In general, learning a…

Single-site dynamics are canonical Markov chain based algorithms for sampling from high-dimensional distributions, such as the Gibbs distributions of graphical models. We introduce a simple and generic parallel algorithm that faithfully…

In this work, we prove the NP-completeness of two variants of tokenisation, defined as the problem of compressing a dataset to at most $\delta$ symbols by either finding a vocabulary directly (direct tokenisation), or selecting a sequence…

We study the electrical distribution network reconfiguration problem, defined as follows. We are given an undirected graph with a root vertex, demand at each non-root vertex, and resistance on each edge. Then, we want to find a spanning…