Related papers: Kingman's coalescent on a random graph
Kingman's coalescent is a random tree that arises from classical population genetic models such as the Moran model. The individuals alive in these models correspond to the leaves in the tree and the following two laws of large numbers…
Consider the Markov process taking values in the partitions of N such that each pair of blocks merges at rate one, and each integer is eroded, i.e., becomes a singleton block, at rate d. This is a special case of exchangeable…
For each $n \ge 1$, let $\mathrm{d}^n=(d^{n}(i),1 \le i \le n)$ be a sequence of positive integers with even sum $\sum_{i=1}^n d^n(i) \ge 2n$. Let $(G_n,T_n,\Gamma_n)$ be uniformly distributed over the set of simple graphs $G_n$ with degree…
We consider the number of common edges in two independent random spanning trees of a graph $G$. For complete graphs $K_n$, we give a new proof of the fact, originally obtained by Moon, that the distribution converges to a Poisson…
A well-established model for the genealogy of a large population in equilibrium is Kingman's coalescent. For the population together with its genealogy evolving in time, this gives rise to a time-stationary tree-valued process. We study the…
We consider the following random model for edge-colored graphs. A graph $G$ on $n$ vertices is fixed, and a random subgraph $G_p$ is chosen by letting each edge of $G$ remain independently with probability $p$. Then, each edge of $G_p$ is…
In this paper, we study the joint behaviour of the degree, depth and label of and graph distance between high-degree vertices in the random recursive tree. We generalise the results obtained by Eslava and extend these to include the labels…
In the Kingman coalescent tree the length of order $r$ is defined as the sum of the lengths of all branches that support $r$ leaves. For $r=1$ these branches are external, while for $r\ge2$ they are internal and carry a subtree with $r$…
The evolving Kingman coalescent is the tree-valued process which records the time evolution undergone by the genealogies of Moran populations. We consider the associated process of total external tree length of the evolving Kingman…
In 1986, Janson showed that the number of edges in the union of $k$ random spanning trees in the complete graph $K_n$ is a shifted Poisson distribution. Using results from the theory of electrical networks, we provide a new proof of this…
The classical model for the genealogies of a neutrally evolving population in a fixed environment is due to Kingman. Kingman's coalescent process, which produces a binary tree, universally emerges from many microscopic models in which the…
We introduce a non-increasing tree growth process $((T_n,\sigma_n),\, n\ge 1)$, where $T_n$ is a rooted labeled tree on $n$ vertices and ${\sigma}_n$ is a permutation of the vertex labels. The construction of $(T_{n},{\sigma}_n)$ from…
We consider a model of a population in which individuals are sampled from different species. The Yule-Kingman nested coalescent describes the genealogy of the sample when each species merges with another randomly chosen species with a…
With the algebraic trees, L\"ohr and Winter (2021) introduced a generalization of the notion of graph-theoretic trees to account for potentially uncountable structures. The tree structure is given by the map which assigns to each triple of…
We establish convergence to the Kingman coalescent for the genealogy of a geographically - or otherwise - structured version of the Wright-Fisher population model with fast migration. The new feature is that migration probabilities may…
The goal of these lectures is to review some mathematical aspects of random tree models used in evolutionary biology to model gene trees or species trees. We start with stochastic models of tree shapes (finite trees without edge lengths),…
The genealogy at a single locus of a constant size $N$ population in equilibrium is given by the well-known Kingman's coalescent. When considering multiple loci under recombination, the ancestral recombination graph encodes the genealogies…
For $n\ge 1$, let $T_n$ be a random recursive tree on the vertex set $[n]=\{1,\ldots,n\}$. Let $\mathrm{deg}_{T_n}(v)$ be the degree of vertex $v$ in $T_n$, that is, the number of children of $v$ in $T_n$. Devroye and Lu showed that the…
We introduce a new Bayesian model for hierarchical clustering based on a prior over trees called Kingman's coalescent. We develop novel greedy and sequential Monte Carlo inferences which operate in a bottom-up agglomerative fashion. We show…
We describe a simple construction of Kingman's coalescent in terms of a Brownian excursion. This construction is closely related to, and sheds some new light on, earlier work by Aldous and Warren. Our approach also yields some new results:…