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Materials science is becoming increasingly more reliant on digital data to facilitate progress in the field. Due to a large diversity in its scope, breadth, and depth, organizing the data in a standard way to optimize the speed and creative…

Materials Science · Physics 2019-03-01 Timur Bazhirov

Undocumented species represent one of the largest hurdles for conservation efforts due to the uncertainty they introduce into conservation planning. Until the distribution of earth's biodiversity is better understood, substantial conjecture…

Populations and Evolution · Quantitative Biology 2023-08-21 Sky Button , Amaël Borzée

Metaproteomics has become a crucial omics technology for studying microbiomes. In this area, the Unipept ecosystem, accessible at https://unipept.ugent.be, has emerged as an invaluable resource for analyzing metaproteomic data. It offers…

Molecular Networks · Quantitative Biology 2023-11-14 Tim Van Den Bossche , Pieter Verschaffelt , Tibo Vande Moortele , Peter Dawyndt , Lennart Martens , Bart Mesuere

We present a novel multi-modal bio-sensing platform capable of integrating multiple data streams for use in real-time applications. The system is composed of a central compute module and a companion headset. The compute node collects,…

Human-Computer Interaction · Computer Science 2018-02-23 Siddharth , Aashish Patel , Tzyy-Ping Jung , Terrence J. Sejnowski

Passive acoustic monitoring has become a key strategy in biodiversity assessment, conservation, and behavioral ecology, especially as Internet-of-Things (IoT) devices enable continuous in situ audio collection at scale. While recent…

Audio and Speech Processing · Electrical Eng. & Systems 2026-02-11 Heitor R. Guimarães , Abhishek Tiwari , Mahsa Abdollahi , Anderson R. Avila , Tiago H. Falk

Biodiversity loss is a critical planetary boundary, yet its connection to computing remains largely unexamined. Prior sustainability efforts in computing have focused on carbon and water, overlooking biodiversity due to the lack of…

Computers and Society · Computer Science 2025-07-01 Tianyao Shi , Ritbik Kumar , Inez Hua , Yi Ding

While integrating multiple modalities has the potential to improve environmental monitoring, current approaches struggle to combine data sources with heterogeneous formats or contents. A central difficulty arises when combining continuous…

Computation and Language · Computer Science 2026-03-27 Valerie Zermatten , Chiara Vanalli , Gencer Sumbul , Diego Marcos , Devis Tuia

Biogeographical regions (geographically distinct assemblages of species and communities) constitute a cornerstone for ecology, biogeography, evolution and conservation biology. Species turnover measures are often used to quantify…

Quantitative Methods · Quantitative Biology 2015-08-19 Daril A. Vilhena , Alexandre Antonelli

Passive acoustic monitoring offers a scalable, non-invasive method for tracking global biodiversity and anthropogenic impacts on species. Although deep learning has become a vital tool for processing this data, current models are…

Machine Learning · Computer Science 2023-08-10 David Robinson , Adelaide Robinson , Lily Akrapongpisak

Biodiversity loss is accelerating at an unprecedented pace, threatening ecosystem stability, economic resilience, and human well-being, with billions required to reverse current trends. Against this backdrop, biodiversity finance has…

General Finance · Quantitative Finance 2026-04-24 Lennart Ante , Friedrich-Philipp Wazinski , Aman Saggu

Explaining why the species lives at a particular location is important for understanding ecological systems and conserving biodiversity. However, existing ecological workflows are fragmented and often inaccessible to non-specialists. We…

Computer Vision and Pattern Recognition · Computer Science 2025-09-10 Yutong Zhou , Masahiro Ryo

The convergence of IoT sensing, edge computing, and machine learning is transforming precision livestock farming. Yet bioacoustic data streams remain underused because of computational complexity and ecological validity challenges. We…

Sound · Computer Science 2025-10-17 Mayuri Kate , Suresh Neethirajan

There is no much doubt that biotic interactions shape community assembly and ultimately the spatial co-variations between species. There is a hope that the signal of these biotic interactions can be observed and retrieved by investigating…

Machine Learning · Statistics 2025-07-15 Sara Si-Moussi , Esther Galbrun , Mickael Hedde , Giovanni Poggiato , Matthias Rohr , Wilfried Thuiller

Detecting and attributing temperature increases driven by climate change is crucial for understanding global warming and informing adaptation strategies. However, distinguishing human-induced climate signals from natural variability remains…

Computer Vision and Pattern Recognition · Computer Science 2025-03-12 Sungduk Yu , Brian L. White , Anahita Bhiwandiwalla , Musashi Hinck , Matthew Lyle Olson , Yaniv Gurwicz , Raanan Y. Rohekar , Tung Nguyen , Vasudev Lal

Technological advances in medical data collection, such as high-throughput genomic sequencing and digital high-resolution histopathology, have contributed to the rising requirement for multimodal biomedical modelling, specifically for…

Machine Learning · Computer Science 2024-10-29 Konstantin Hemker , Nikola Simidjievski , Mateja Jamnik

Biological and biomedical imaging datasets record the constitution, architecture and dynamics of living organisms across several orders of magnitude of space and time. Imaging technologies are now used throughout the life and biomedical…

Climate change is a major driver of biodiversity loss, changing the geographic range and abundance of many species. However, there remain significant knowledge gaps about the distribution of species, due principally to the amount of effort…

Computer Vision and Pattern Recognition · Computer Science 2023-05-03 Mélisande Teng , Amna Elmustafa , Benjamin Akera , Hugo Larochelle , David Rolnick

1. Many ecological decisions are slowed by the gap between collecting and analysing biodiversity data. Edge computing moves processing closer to the sensor, with edge artificial intelligence (AI) enabling on-device inference, reducing…

Computers and Society · Computer Science 2026-02-17 Aude Vuilliomenet , Kate E. Jones , Duncan Wilson

Many, if not most, systems of interest in science are naturally described as nonlinear dynamical systems. Empirically, we commonly access these systems through time series measurements. Often such time series may consist of discrete random…

Machine Learning · Computer Science 2024-06-10 Manuel Brenner , Florian Hess , Georgia Koppe , Daniel Durstewitz

Biological tree (BioTree) analysis is a foundational tool in biology, enabling the exploration of evolutionary and differentiation relationships among organisms, genes, and cells. Traditional tree construction methods, while instrumental in…

Populations and Evolution · Quantitative Biology 2025-02-18 Zelin Zang , Yongjie Xu , Chenrui Duan , Yue Yuan , Jinlin Wu , Zhen Lei , Stan Z. Li