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Global biodiversity is declining at an unprecedented rate, yet little information is known about most species and how their populations are changing. Indeed, some 90% of Earth's species are estimated to be completely unknown. Machine…

Computer Vision and Pattern Recognition · Computer Science 2025-11-18 Yuyan Chen , Nico Lang , B. Christian Schmidt , Aditya Jain , Yves Basset , Sara Beery , Maxim Larrivée , David Rolnick

Growing anthropogenic pressures have increased the need for robust predictive models. Meeting this demand requires approaches that can handle bigger data to yield forecasts that capture the variability and underlying uncertainty of…

Quantitative Methods · Quantitative Biology 2024-08-06 EM Wolkovich , T Jonathan Davies , William D Pearse , Michael Betancourt

Camera traps offer enormous new opportunities in ecological studies, but current automated image analysis methods often lack the contextual richness needed to support impactful conservation outcomes. Here we present an integrated approach…

Computer Vision and Pattern Recognition · Computer Science 2024-11-22 Paul Fergus , Carl Chalmers , Naomi Matthews , Stuart Nixon , Andre Burger , Oliver Hartley , Chris Sutherland , Xavier Lambin , Steven Longmore , Serge Wich

Street trees are vital to urban livability, providing ecological and social benefits. Establishing a detailed, accurate, and dynamically updated street tree inventory has become essential for optimizing these multifunctional assets within…

Computer Vision and Pattern Recognition · Computer Science 2026-03-10 Ruifei Ding , Zhe Chen , Wen Fan , Chen Long , Huijuan Xiao , Yelu Zeng , Zhen Dong , Bisheng Yang

Increasingly sophisticated experiments, coupled with large-scale computational models, have the potential to systematically test biological hypotheses to drive our understanding of multicellular systems. In this short review, we explore key…

Quantitative Methods · Quantitative Biology 2019-10-28 Paul Macklin

Bioacoustics, the study of sounds produced by living organisms, plays a vital role in conservation, biodiversity monitoring, and behavioral studies. Many tasks in this field, such as species, individual, and behavior classification and…

Spatial structure and species interactions jointly shape the dynamics and biodiversity of ecological systems, yet most theoretical models either neglect spatial heterogeneity or sacrifice analytical tractability. Here, we provide a unified…

Populations and Evolution · Quantitative Biology 2026-05-08 Davide Bernardi , Alice Doimo , Giorgio Nicoletti , Prajwal Padmanabha , Andrea Rinaldo , Samir Suweis , Sandro Azaele , Amos Maritan

Accurate taxonomic classification from DNA barcodes is a cornerstone of global biodiversity monitoring, yet fungi present extreme challenges due to sparse labelling and long-tailed taxa distributions. Conventional supervised learning…

Machine Learning · Computer Science 2025-12-19 Tiancheng Gao , Scott C. Lowe , Brendan Furneaux , Angel X Chang , Graham W. Taylor

Biogenic Volatile Organic Compounds (BVOCs) play a critical role in biosphere-atmosphere interactions, being a key factor in the physical and chemical properties of the atmosphere and climate. Acquiring large and fine-grained BVOC emission…

Image and Video Processing · Electrical Eng. & Systems 2023-07-04 Antonio Giganti , Sara Mandelli , Paolo Bestagini , Marco Marcon , Stefano Tubaro

DNA barcodes are crucial in biodiversity analysis for building automatic identification systems that recognize known species and discover unseen species. Unlike human genome modeling, barcode-based invertebrate identification poses…

Machine Learning · Computer Science 2024-12-17 Tiancheng Gao , Graham W. Taylor

The modeling of environmental ecosystems plays a pivotal role in the sustainable management of our planet. Accurate prediction of key environmental variables over space and time can aid in informed policy and decision-making, thus improving…

Computation and Language · Computer Science 2024-08-13 Haoran Li , Junqi Liu , Zexian Wang , Shiyuan Luo , Xiaowei Jia , Huaxiu Yao

The increasing volumes of data produced by high-throughput instruments coupled with advanced computational infrastructures for scientific computing have enabled what is often called a {\em Fourth Paradigm} for scientific research based on…

Species detection is important for monitoring the health of ecosystems and identifying invasive species, serving a crucial role in guiding conservation efforts. Multimodal neural networks have seen increasing use for identifying species to…

Computer Vision and Pattern Recognition · Computer Science 2025-11-26 Muchang Bahng , Charlie Berens , Jon Donnelly , Eric Chen , Chaofan Chen , Cynthia Rudin

Accurate biodiversity identification from large-scale field data is a foundational problem with direct impact on ecology, conservation, and environmental monitoring. In practice, the core task is taxonomic prediction - inferring order,…

Computer Vision and Pattern Recognition · Computer Science 2026-03-27 Sk Miraj Ahmed , Xi Yu , Yunqi Li , Yuewei Lin , Wei Xu

Marine biodiversity monitoring requires scalability and reliability across complex underwater environments to support conservation and invasive-species management. Yet existing detection solutions often exhibit a pronounced deployment gap,…

Computer Vision and Pattern Recognition · Computer Science 2026-01-21 Marco Piccolo , Qiwei Han , Astrid van Toor , Joachim Vanneste

This paper presents a robotic mowing framework that actively enhances garden biodiversity through visual perception and adaptive decision-making. Unlike passive rewilding approaches, the proposed system uses deep feature-space analysis to…

Computer Vision and Pattern Recognition · Computer Science 2025-12-19 Lars Beckers , Arno Waes , Aaron Van Campenhout , Toon Goedemé

Science mapping (SM), the study of the organization and development of science and technology, is a rapidly developing field within information science. The volume of available data allows this methodology to empirically address such issues…

Digital Libraries · Computer Science 2014-09-25 Sandor Soos

Protecting and restoring forest ecosystems is critical for biodiversity conservation and carbon sequestration. Forest monitoring on a global scale is essential for prioritizing and assessing conservation efforts. Satellite-based remote…

Computer Vision and Pattern Recognition · Computer Science 2024-06-28 Luis Miguel Pazos-Outón , Cristina Nader Vasconcelos , Anton Raichuk , Anurag Arnab , Dan Morris , Maxim Neumann

Assessment of forest biodiversity is crucial for ecosystem management and conservation. While traditional field surveys provide high-quality assessments, they are labor-intensive and spatially limited. This study investigates whether deep…

Computer Vision and Pattern Recognition · Computer Science 2025-12-17 Simon B. Jensen , Stefan Oehmcke , Andreas Møgelmose , Meysam Madadi , Christian Igel , Sergio Escalera , Thomas B. Moeslund

Recent years have seen a significant increase in demand for robotic solutions in unstructured natural environments, alongside growing interest in bridging 2D and 3D scene understanding. However, existing robotics datasets are predominantly…

Computer Vision and Pattern Recognition · Computer Science 2026-03-03 Joshua Knights , Joseph Reid , Kaushik Roy , David Hall , Mark Cox , Peyman Moghadam
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