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Controlling real-world networked systems, including ecological, biomedical, and engineered networks that exhibit higher-order interactions, remains challenging due to inherent nonlinearities and large system scales. Despite extensive…

Optimization and Control · Mathematics 2026-03-23 Joshua Pickard , Xin Mao , Can Chen

Large language models (LLMs) have recently shown strong potential in modeling relational structures. However, existing approaches remain fundamentally graph-centric: they focus on processing pairwise graph structures into tokens that LLMs…

Computation and Language · Computer Science 2026-05-22 Mengqi Lei , Guohuan Xie , Shihui Ying , Shaoyi Du , Jun-Hai Yong , Siqi Li , Yue Gao

We study the implications of the modeling choice to use a graph, instead of a hypergraph, to represent real-world interconnected systems whose constituent relationships are of higher order by nature. Such a modeling choice typically…

Machine Learning · Computer Science 2024-01-17 Yanbang Wang , Jon Kleinberg

In this work, we present the first linear time deterministic algorithm computing the 4-edge-connected components of an undirected graph. First, we show an algorithm listing all 3-edge-cuts in a given 3-edge-connected graph, and then we use…

Data Structures and Algorithms · Computer Science 2021-05-06 Wojciech Nadara , Mateusz Radecki , Marcin Smulewicz , Marek Sokołowski

Interaction graphs were introduced as a general, uniform, construction of dynamic models of linear logic, encompassing all "Geometry of Interaction" (GoI) constructions introduced so far. This series of work was inspired from Girard's…

Logic in Computer Science · Computer Science 2016-05-10 Thomas Seiller

Scientific inquiry requires systems-level reasoning that integrates heterogeneous experimental data, cross-domain knowledge, and mechanistic evidence into coherent explanations. While Large Language Models (LLMs) offer inferential…

Artificial Intelligence · Computer Science 2026-01-09 Isabella A. Stewart , Markus J. Buehler

We present a simple yet highly generalizable method for explaining interacting parts within a neural network's reasoning process. First, we design an algorithm based on cross derivatives for computing statistical interaction effects between…

Machine Learning · Computer Science 2021-10-12 Samuel Lerman , Chenliang Xu , Charles Venuto , Henry Kautz

As data structures and mathematical objects used for complex systems modeling, hypergraphs sit nicely poised between on the one hand the world of network models, and on the other that of higher-order mathematical abstractions from algebra,…

We study connected graphs with a fixed degree sequence, in the sparse setting where the number of edges grows linearly in the number of vertices. Using the relation to the configuration model, we identify the number of such connected graphs…

Combinatorics · Mathematics 2026-05-11 Sasha Bell , Serte Donderwinkel , Remco van der Hofstad

Hypergraphs are characterized by complex topological structure, representing higher-order interactions among multiple entities through hyperedges. Lately, hypergraph-based deep learning methods to learn informative data representations for…

Machine Learning · Computer Science 2024-09-30 Adrián Bazaga , Pietro Liò , Gos Micklem

All intelligence is collective intelligence, in the sense that it is made of parts which must align with respect to system-level goals. Understanding the dynamics which facilitate or limit navigation of problem spaces by aligned parts thus…

Statistical Mechanics · Physics 2026-05-18 Francesco Sacco , Dalton A R Sakthivadivel , Michael Levin

First-order logic (FO) can express many algorithmic problems on graphs, such as the independent set and dominating set problem, parameterized by solution size. On the other hand, FO cannot express the very simple algorithmic question of…

Logic in Computer Science · Computer Science 2021-11-10 Nicole Schirrmacher , Sebastian Siebertz , Alexandre Vigny

Independent Component Analysis (ICA) offers interpretable semantic components of embeddings. While ICA theory assumes that embeddings can be linearly decomposed into independent components, real-world data often do not satisfy this…

Computation and Language · Computer Science 2024-10-10 Momose Oyama , Hiroaki Yamagiwa , Hidetoshi Shimodaira

In the binomial random graph $\mathcal{G}(n,p)$, when $p$ changes from $(1-\varepsilon)/n$ (subcritical case) to $1/n$ and then to $(1+\varepsilon)/n$ (supercritical case) for $\varepsilon>0$, with high probability the order of the largest…

Combinatorics · Mathematics 2018-10-19 Oliver Cooley , Wenjie Fang , Nicola Del Giudice , Mihyun Kang

Many networked systems are governed by non-pairwise interactions between nodes. The resulting higher-order interaction structure can then be encoded by means of a hypernetwork. In this paper we consider dynamical systems on hypernetworks by…

Dynamical Systems · Mathematics 2023-08-11 Sören von der Gracht , Eddie Nijholt , Bob Rink

The richness of many complex systems stems from the interactions among their components. The higher-order nature of these interactions, involving many units at once, and their temporal dynamics constitute crucial properties that shape the…

Physics and Society · Physics 2024-07-29 Marco Mancastroppa , Iacopo Iacopini , Giovanni Petri , Alain Barrat

Individuals interact and cooperate in structured systems. Many studies represent this structure using static networks, where each link represents a permanent connection between two nodes. However, real interactions are generally not…

Physics and Society · Physics 2025-12-23 Xiaochen Wang , Lei Zhou , Alex McAvoy , Zhenglong Tian , Aming Li

Learning from structured data is a core machine learning task. Commonly, such data is represented as graphs, which normally only consider (typed) binary relationships between pairs of nodes. This is a substantial limitation for many domains…

Machine Learning · Computer Science 2022-09-07 Dobrik Georgiev , Marc Brockschmidt , Miltiadis Allamanis

The network representation is becoming increasingly popular for the description of cardiovascular interactions based on the analysis of multiple simultaneously collected variables. However, the traditional methods to assess network links…

In network science, collective dynamics of complex systems are typically modelled as (nonlinear, often including many-body) vertex-level update rules evolving over a graph interaction structure. In recent years, frameworks that explicitly…

Physics and Society · Physics 2026-03-03 Lucas Lacasa
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