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We describe our two-stage system for the Multilingual Information Access (MIA) 2022 Shared Task on Cross-Lingual Open-Retrieval Question Answering. The first stage consists of multilingual passage retrieval with a hybrid dense and sparse…

Computation and Language · Computer Science 2022-07-19 Zhucheng Tu , Sarguna Janani Padmanabhan

Current research in form understanding predominantly relies on large pre-trained language models, necessitating extensive data for pre-training. However, the importance of layout structure (i.e., the spatial relationship between the entity…

Computation and Language · Computer Science 2024-06-05 Pritika Ramu , Sijia Wang , Lalla Mouatadid , Joy Rimchala , Lifu Huang

Dense retrieval is widely used for entity linking to retrieve entities from large-scale knowledge bases. Mainstream techniques are based on a dual-encoder framework, which encodes mentions and entities independently and calculates their…

Computation and Language · Computer Science 2023-05-30 Yi Liu , Yuan Tian , Jianxun Lian , Xinlong Wang , Yanan Cao , Fang Fang , Wen Zhang , Haizhen Huang , Denvy Deng , Qi Zhang

Multimodal named entity recognition (MNER) and multimodal relation extraction (MRE) are two fundamental subtasks in the multimodal knowledge graph construction task. However, the existing methods usually handle two tasks independently,…

Computation and Language · Computer Science 2023-02-21 Li Yuan , Yi Cai , Jin Wang , Qing Li

Document Understanding is an evolving field in Natural Language Processing (NLP). In particular, visual and spatial features are essential in addition to the raw text itself and hence, several multimodal models were developed in the field…

Computation and Language · Computer Science 2024-04-18 Wiam Adnan , Joel Tang , Yassine Bel Khayat Zouggari , Seif Edinne Laatiri , Laurent Lam , Fabien Caspani

Successful biomedical relation extraction can provide evidence to researchers and clinicians about possible unknown associations between biomedical entities, advancing the current knowledge we have about those entities and their inherent…

Information Retrieval · Computer Science 2020-04-22 Diana Sousa , Francisco M. Couto

Intelligently extracting and linking complex scientific information from unstructured text is a challenging endeavor particularly for those inexperienced with natural language processing. Here, we present a simple sequence-to-sequence…

Computation and Language · Computer Science 2022-12-13 Alexander Dunn , John Dagdelen , Nicholas Walker , Sanghoon Lee , Andrew S. Rosen , Gerbrand Ceder , Kristin Persson , Anubhav Jain

Entity relationship extraction envisions the automatic generation of semantic data models from collections of text, by automatic recognition of entities, by association of entities to form relationships, and by classifying these instances…

Information Retrieval · Computer Science 2022-01-17 Michael Kaufmann

Structured information extraction from scientific literature is crucial for capturing core concepts and emerging trends in specialized fields. While existing datasets aid model development, most focus on specific publication sections due to…

Computation and Language · Computer Science 2026-04-06 Decheng Duan , Yingyi Zhang , Jitong Peng , Chengzhi Zhang

This study introduces a novel approach to sentence-level relation extraction (RE) that integrates Graph Neural Networks (GNNs) with Large Language Models (LLMs) to generate contextually enriched support documents. By harnessing the power of…

Computation and Language · Computer Science 2024-11-01 Vicky Dong , Hao Yu , Yao Chen

Domain-specific Named Entity Recognition (NER), whose goal is to recognize domain-specific entities and their categories, provides an important support for constructing domain knowledge graphs. Currently, deep learning-based methods are…

Computation and Language · Computer Science 2024-09-17 Le Xiao , Yunfei Xu , Jing Zhao

In medical information extraction, medical Named Entity Recognition (NER) is indispensable, playing a crucial role in developing medical knowledge graphs, enhancing medical question-answering systems, and analyzing electronic medical…

Computation and Language · Computer Science 2024-03-26 Xiaojing Du , Hanjie Zhao , Danyan Xing , Yuxiang Jia , Hongying Zan

Drug-target interaction (DTI) prediction plays a crucial role in drug discovery, and deep learning approaches have achieved state-of-the-art performance in this field. We introduce an ensemble of deep learning models (EnsembleDLM) for DTI…

Biomolecules · Quantitative Biology 2022-01-19 Po-Yu Kao , Shu-Min Kao , Nan-Lan Huang , Yen-Chu Lin

Multimodal Large Language Models (MLLMs) have shown transformative potential in medical applications, yet their performance is hindered by conventional data curation strategies that rely on coarse-grained partitioning by modality or…

Computation and Language · Computer Science 2026-04-29 Jianghang Lin , Haihua Yang , Deli Yu , Kai Wu , Kai Ye , Jinghao Lin , Zihan Wang , Yuhang Wu , Liujuan Cao

Section identification is an important task for library science, especially knowledge management. Identifying the sections of a paper would help filter noise in entity and relation extraction. In this research, we studied the paper section…

Computation and Language · Computer Science 2024-12-17 Sijia Zhou , Xin Li

Document-level relation extraction (DocRE) poses the challenge of identifying relationships between entities within a document as opposed to the traditional RE setting where a single sentence is input. Existing approaches rely on logical…

Information Retrieval · Computer Science 2024-01-23 Monika Jain , Raghava Mutharaju , Ramakanth Kavuluru , Kuldeep Singh

Knowledge-enhanced pre-trained models for language representation have been shown to be more effective in knowledge base construction tasks (i.e.,~relation extraction) than language models such as BERT. These knowledge-enhanced language…

Computation and Language · Computer Science 2022-10-25 Jiacheng Li , Yannis Katsis , Tyler Baldwin , Ho-Cheol Kim , Andrew Bartko , Julian McAuley , Chun-Nan Hsu

Distantly supervised relation extraction intrinsically suffers from noisy labels due to the strong assumption of distant supervision. Most prior works adopt a selective attention mechanism over sentences in a bag to denoise from wrongly…

Computation and Language · Computer Science 2019-11-28 Yang Li , Guodong Long , Tao Shen , Tianyi Zhou , Lina Yao , Huan Huo , Jing Jiang

Distant Supervised Relation Extraction (DSRE) is usually formulated as a problem of classifying a bag of sentences that contain two query entities, into the predefined relation classes. Most existing methods consider those relation classes…

Computation and Language · Computer Science 2019-12-16 Yanjie Gou , Yinjie Lei , Lingqiao Liu , Pingping Zhang , Xi Peng

The rapid growth in literature accumulates diverse and yet comprehensive biomedical knowledge hidden to be mined such as drug interactions. However, it is difficult to extract the heterogeneous knowledge to retrieve or even discover the…

Computation and Language · Computer Science 2021-01-26 Lei Huang , Jiecong Lin , Xiangtao Li , Linqi Song , Ka-Chun Wong