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Document-level relation extraction (DocRE) aims to extract relations between entities from unstructured document text. Compared to sentence-level relation extraction, it requires more complex semantic understanding from a broader text…

Computation and Language · Computer Science 2024-09-10 Yanxu Mao , Xiaohui Chen , Peipei Liu , Tiehan Cui , Zuhui Yue , Zheng Li

Relation extraction from text is an important task for automatic knowledge base population. In this thesis, we first propose a syntax-focused multi-factor attention network model for finding the relation between two entities. Next, we…

Computation and Language · Computer Science 2021-04-06 Tapas Nayak

Joint medical relation extraction refers to extracting triples, composed of entities and relations, from the medical text with a single model. One of the solutions is to convert this task into a sequential tagging task. However, in the…

Computation and Language · Computer Science 2022-08-18 Xukun Luo , Weijie Liu , Meng Ma , Ping Wang

Recent years have seen rapid progress in identifying predefined relationship between entity pairs using neural networks NNs. However, such models often make predictions for each entity pair individually, thus often fail to solve the…

Computation and Language · Computer Science 2019-11-27 Yuan Ye , Yansong Feng , Bingfeng Luo , Yuxuan Lai , Dongyan Zhao

Document-level event extraction (DEE) faces two main challenges: arguments-scattering and multi-event. Although previous methods attempt to address these challenges, they overlook the interference of event-unrelated sentences during event…

Computation and Language · Computer Science 2023-10-17 Gang Zhao , Yidong Shi , Shudong Lu , Xinjie Yang , Guanting Dong , Jian Xu , Xiaocheng Gong , Si Li

Clinical Named Entity Recognition (CNER) aims to identify and classify clinical terms such as diseases, symptoms, treatments, exams, and body parts in electronic health records, which is a fundamental and crucial task for clinical and…

Computation and Language · Computer Science 2018-04-16 Qi Wang , Yuhang Xia , Yangming Zhou , Tong Ruan , Daqi Gao , Ping He

A major proportion of a text summary includes important entities found in the original text. These entities build up the topic of the summary. Moreover, they hold commonsense information once they are linked to a knowledge base. Based on…

Computation and Language · Computer Science 2018-06-15 Reinald Kim Amplayo , Seonjae Lim , Seung-won Hwang

Negative medical findings are prevalent in clinical reports, yet discriminating them from positive findings remains a challenging task for information extraction. Most of the existing systems treat this task as a pipeline of two separate…

Computation and Language · Computer Science 2020-01-23 Parminder Bhatia , Busra Celikkaya , Mohammed Khalilia

In this paper, we report our method for the Information Extraction task in 2019 Language and Intelligence Challenge. We incorporate BERT into the multi-head selection framework for joint entity-relation extraction. This model extends…

Computation and Language · Computer Science 2019-09-27 Weipeng Huang , Xingyi Cheng , Taifeng Wang , Wei Chu

Entity and Relation Extraction (ERE) is an important task in information extraction. Recent marker-based pipeline models achieve state-of-the-art performance, but still suffer from the error propagation issue. Also, most of current ERE…

Computation and Language · Computer Science 2023-10-27 Zhaohui Yan , Songlin Yang , Wei Liu , Kewei Tu

Biomedical triple extraction systems aim to automatically extract biomedical entities and relations between entities. The exploration of applying large language models (LLM) to triple extraction is still relatively unexplored. In this work,…

Computation and Language · Computer Science 2024-04-30 Mingchen Li , Huixue Zhou , Rui Zhang

Event Causality Extraction (ECE) aims at extracting causal event pairs from texts. Despite ChatGPT's recent success, fine-tuning small models remains the best approach for the ECE task. However, existing fine-tuning based ECE methods cannot…

Computation and Language · Computer Science 2024-08-07 Jinglong Gao , Chen Lu , Xiao Ding , Zhongyang Li , Ting Liu , Bing Qin

In practical scenario, relation extraction needs to first identify entity pairs that have relation and then assign a correct relation class. However, the number of non-relation entity pairs in context (negative instances) usually far…

Computation and Language · Computer Science 2019-06-24 Wei Ye , Bo Li , Rui Xie , Zhonghao Sheng , Long Chen , Shikun Zhang

Predicting drug-target interaction (DTI) is critical in the drug discovery process. Despite remarkable advances in recent DTI models through the integration of representations from diverse drug and target encoders, such models often…

Quantitative Methods · Quantitative Biology 2025-09-30 Zhaohan Meng , Zaiqiao Meng , Ke Yuan , Iadh Ounis

Stepping from sentence-level to document-level, the research on relation extraction (RE) confronts increasing text length and more complicated entity interactions. Consequently, it is more challenging to encode the key information…

Computation and Language · Computer Science 2022-05-03 Yuxin Xiao , Zecheng Zhang , Yuning Mao , Carl Yang , Jiawei Han

Large Language Models (LLMs) have achieved remarkable success across a wide range of natural language processing tasks. However, Chinese LLMs face unique challenges, primarily due to the dominance of unstructured free text and the lack of…

Computation and Language · Computer Science 2025-10-08 Chengwei Wu , Jiapu Wang , Mingyang Gao , Xingrui Zhuo , Jipeng Guo , Runlin Lei , Haoran Luo , Tianyu Chen , Haoyi Zhou , Shirui Pan , Zechao Li

Document-level relation extraction (DocRE) is a task that focuses on identifying relations between entities within a document. However, existing DocRE models often overlook the correlation between relations and lack a quantitative analysis…

Information Retrieval · Computer Science 2023-10-23 Yusheng Huang , Zhouhan Lin

Disease name recognition and normalization, which is generally called biomedical entity linking, is a fundamental process in biomedical text mining. Recently, neural joint learning of both tasks has been proposed to utilize the mutual…

Computation and Language · Computer Science 2021-04-22 Shogo Ujiie , Hayate Iso , Shuntaro Yada , Shoko Wakamiya , Eiji Aramaki

Many joint entity relation extraction models setup two separated label spaces for the two sub-tasks (i.e., entity detection and relation classification). We argue that this setting may hinder the information interaction between entities and…

Computation and Language · Computer Science 2021-07-12 Yijun Wang , Changzhi Sun , Yuanbin Wu , Hao Zhou , Lei Li , Junchi Yan

Joint Entity and Relation Extraction (JERE) is highly sensitive to training data quality, making data augmentation a natural way to improve generalization. However, existing augmentation methods often weaken entity relevance and disrupt…

Computation and Language · Computer Science 2026-05-29 Jiawei He , Mengyu Shi , Jiawei Liu , Dong Sun , Chunrong Fang , Xikai Yang , Zhijie Wang , Lei Ma , Zhenyu Chen