English
Related papers

Related papers: Exploring Large Protein Language Models in Constra…

200 papers

Motivation: Proteins are of great significance in living organisms. However, understanding their functions encounters numerous challenges, such as insufficient integration of multimodal information, a large number of training parameters,…

Machine Learning · Computer Science 2025-05-23 Zhicong Wang , Zicheng Ma , Ziqiang Cao , Changlong Zhou , Jun Zhang , Yiqin Gao

Large language models (LLMs) have demonstrated exceptional proficiency in understanding and generating human language, but efficient inference on resource-constrained embedded devices remains challenging due to large model sizes and…

Hardware Architecture · Computer Science 2025-07-15 Weihong Xu , Haein Choi , Po-kai Hsu , Shimeng Yu , Tajana Rosing

Molecular dynamics (MD) is a powerful approach for modelling molecular systems, but it remains computationally intensive on spatial and time scales of many macromolecular systems of biological interest. To explore the opportunities offered…

Biomolecules · Quantitative Biology 2025-08-07 Mhd Hussein Murtada , Z. Faidon Brotzakis , Michele Vendruscolo

Recent advances show that large language models (LLMs) generalize strong performance across different natural language benchmarks. However, the large size of LLMs makes training and inference expensive and impractical to run in…

Computation and Language · Computer Science 2024-10-22 Laurence Liang

The Split and Rephrase (SPRP) task, which consists in splitting complex sentences into a sequence of shorter grammatical sentences, while preserving the original meaning, can facilitate the processing of complex texts for humans and…

Computation and Language · Computer Science 2024-10-11 David Ponce , Thierry Etchegoyhen , Jesús Calleja Pérez , Harritxu Gete

It is widely agreed that open-vocabulary-based approaches outperform classical closed-set training solutions for recognizing unseen objects in images for semantic segmentation. Existing open-vocabulary approaches leverage vision-language…

Computer Vision and Pattern Recognition · Computer Science 2026-02-19 Huadong Tang , Youpeng Zhao , Yan Huang , Min Xu , Jun Wang , Qiang Wu

Existing benchmarks have proven effective for assessing the performance of fully trained large language models. However, we find striking differences in the early training stages of small models, where benchmarks often fail to provide…

Conventional mechanical design follows an iterative process in which initial concepts are refined through cycles of expert assessment and resource-intensive Finite Element Method (FEM) analysis to meet performance goals. While machine…

Machine Learning · Computer Science 2025-05-02 Yayati Jadhav , Amir Barati Farimani

Protein language models trained on the masked language modeling objective learn to predict the identity of hidden amino acid residues within a sequence using the remaining observable sequence as context. They do so by embedding the residues…

Biomolecules · Quantitative Biology 2024-07-11 Pranav Kantroo , Günter P. Wagner , Benjamin B. Machta

Protein is linked to almost every life process. Therefore, analyzing the biological structure and property of protein sequences is critical to the exploration of life, as well as disease detection and drug discovery. Traditional protein…

Machine Learning · Computer Science 2021-12-08 Yijia Xiao , Jiezhong Qiu , Ziang Li , Chang-Yu Hsieh , Jie Tang

Large Language Models (LLMs) have so far impressed the world, with unprecedented capabilities that emerge in models at large scales. On the vision side, transformer models (i.e., ViT) are following the same trend, achieving the best…

Computer Vision and Pattern Recognition · Computer Science 2023-10-30 Mustafa Shukor , Corentin Dancette , Matthieu Cord

Large language models (LLMs) show best-in-class performance across a wide range of natural language processing applications. Training these models is an extremely computationally expensive task; frontier Artificial Intelligence (AI)…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-10-10 Alexander Interrante-Grant , Carla Varela-Rosa , Suhaas Narayan , Chris Connelly , Albert Reuther

This study investigates the factors influencing the performance of multilingual large language models (MLLMs) across diverse languages. We study 6 MLLMs, including masked language models, autoregressive models, and instruction-tuned LLMs,…

Computation and Language · Computer Science 2024-12-10 Sina Bagheri Nezhad , Ameeta Agrawal

Crafting effective features is a crucial yet labor-intensive and domain-specific task within machine learning pipelines. Fortunately, recent advancements in Large Language Models (LLMs) have shown promise in automating various data science…

Computation and Language · Computer Science 2024-10-18 Yanlin Zhang , Ning Li , Quan Gan , Weinan Zhang , David Wipf , Minjie Wang

Recent advances in vision-language models (VLMs) trained on web-scale image-text pairs have enabled impressive zero-shot transfer across a diverse range of visual tasks. However, comprehensive and independent evaluation beyond standard…

Computer Vision and Pattern Recognition · Computer Science 2026-04-07 Jia Chengyu , AprilPyone MaungMaung , Huy H. Nguyen , Jinyin Chen , Isao Echizen

Pre-trained language models (PrLM) have to carefully manage input units when training on a very large text with a vocabulary consisting of millions of words. Previous works have shown that incorporating span-level information over…

Computation and Language · Computer Science 2021-09-16 Rongzhou Bao , Zhuosheng Zhang , Hai Zhao

In recent years, Large Language Models (LLMs) have emerged as a prominent area of interest across various research domains, including Process Mining (PM). Current applications in PM have predominantly centered on prompt engineering…

Computation and Language · Computer Science 2025-09-04 Rafael Seidi Oyamada , Jari Peeperkorn , Jochen De Weerdt , Johannes De Smedt

Modern Protein Language Models (PLMs) apply transformer-based model architectures from natural language processing to biological sequences, predicting a variety of protein functions and properties. However, protein language has key…

Machine Learning · Computer Science 2026-02-25 Anna Hart , Chi Han , Jeonghwan Kim , Huimin Zhao , Heng Ji

Large Language Models (LLMs) have the potential to semi-automate some process mining (PM) analyses. While commercial models are already adequate for many analytics tasks, the competitive level of open-source LLMs in PM tasks is unknown. In…

Computation and Language · Computer Science 2024-07-19 Alessandro Berti , Humam Kourani , Wil M. P. van der Aalst

Vision-language models (VLMs) have made substantial progress across a wide range of visual question answering benchmarks, spanning visual reasoning, document understanding, and multimodal dialogue. These improvements are evident in a wide…

Computer Vision and Pattern Recognition · Computer Science 2026-02-23 Dhruba Ghosh , Yuhui Zhang , Ludwig Schmidt
‹ Prev 1 4 5 6 7 8 10 Next ›