Related papers: Binary Galton-Watson trees with mutations
We consider a (sub) critical Galton-Watson process with neutral mutations (infinite alleles model), and decompose the entire population into clusters of individuals carrying the same allele. We specify the law of this allelic partition in…
We prove exponential moments for linear combinations of the number of individuals of each type of a whole multitype Poissonian Galton Watson process. We give sharp estimates for such quantities, which depend on the expectation of the…
We study various models of random non-crossing configurations consisting of diagonals of convex polygons, and focus in particular on uniform dissections and non-crossing trees. For both these models, we prove convergence in distribution…
We introduce the notion of a hereditary property for rooted real trees and we also consider reduction of trees by a given hereditary property. Leaf-length erasure, also called trimming, is included as a special case of hereditary reduction.…
We consider a conditioned Galton-Watson tree and prove an estimate of the number of pairs of vertices with a given distance, or, equivalently, the number of paths of a given length. We give two proofs of this result, one probabilistic and…
We investigate the genealogical structure of general critical or subcritical continuous-state branching processes. Analogously to the coding of a discrete tree by its contour function, this genealogical structure is coded by a real-valued…
Phylogenetic trees are simple models of evolutionary processes. They describe conditionally independent divergent evolution of taxa from common ancestors. Phylogenetic trees commonly do not have enough flexibility to adequately model all…
For supercritical multitype branching processes in continuous time, we investigate the evolution of types along those lineages that survive up to some time t. We establish almost-sure convergence theorems for both time and population…
A number of methods have been developed to infer differential rates of species diversification through time and among clades using time-calibrated phylogenetic trees. However, we lack a general framework that can delineate and quantify…
We study a model of a branching process subject to selection, modeled by giving each family an individual fitness acting as a branching rate, and mutation, modeled by resampling the fitness of a proportion of offspring in each generation.…
Invariant Galton-Watson (IGW) tree measures is a one-parameter family of critical Galton-Watson measures invariant with respect to a large class of tree reduction operations. Such operations include the generalized dynamical pruning (also…
We consider Galton-Watson trees associated with a critical offspring distribution and conditioned to have exactly $n$ vertices. These trees are embedded in the real line by affecting spatial positions to the vertices, in such a way that the…
In this paper the Galton Watson branching process has been studied for a class of offspring distributions which are in a way sandwiched between the Bernoulli and Poisson.
Given overlapping subsets of a set of taxa (e.g. species), and posterior distributions on phylogenetic tree topologies for each of these taxon sets, how can we infer a posterior distribution on phylogenetic tree topologies for the entire…
We introduce two models for multi-type random trees motivated by studies of trait dependence in the evolution of species. Our discrete time model, the multi-type ERM tree, is a generalization of Markov propagation models on a random tree…
This paper develops a methodology for approximating the posterior first two moments of the posterior distribution in Bayesian inference. Partially specified probability models, which are defined only by specifying means and variances, are…
For general repeated measures designs the Wald-type statistic (WTS) is an asymptotically valid procedure allowing for unequal covariance matrices and possibly non-normal multivariate observations. The drawback of this procedure is the poor…
We propose a novel class of count time series models alternative to the classic Galton-Watson process with immigration (GWI) and Bernoulli offspring. A new offspring mechanism is developed and its properties are explored. This novel…
We consider invasion percolation on Galton-Watson trees. On almost every Galton-Watson tree, the invasion cluster almost surely contains only one infinite path. This means that for almost every Galton-Watson tree, invasion percolation…
In a (two-type) Wright-Fisher diffusion with directional selection and two-way mutation, let $x$ denote today's frequency of the beneficial type, and given $x$, let $h(x)$ be the probability that, among all individuals of today's…