English
Related papers

Related papers: DNA codes from $(\text{\textbaro}, \mathfrak{d}, \…

200 papers

In the present paper we study the structure of cyclic DNA codes of even lenght over the ring $\mathbb{F}_2+u\mathbb{F}_2+u^2\mathbb{F}_2$ where $u^3=0$. We investigate two presentations of cyclic codes of even lenght over…

Information Theory · Computer Science 2016-03-21 Hojjat Mostafanasab , Ahmad Yousefian Darani

In this article, we construct new non-binary quantum codes from skew constacyclic codes over finite commutative non-chain ring $\mathcal{R}= \mathbb{F}_{p^m}[v]/\langle v^3 =v \rangle$ where $p$ is an odd prime and $m \geq 1$. In order to…

Information Theory · Computer Science 2020-10-15 Ram Krishna Verma , Om Prakash , Ashutosh Singh

In this work, we study the structure of cyclic DNA codes of arbitrary lengths over the ring R=F2+uF2+vF2+uvF2 and establish relations to codes over R1=F2+uF2 by defining a Gray map between R and R1^2 where R1 is the ring with 4 elements.…

Information Theory · Computer Science 2015-08-31 Shixin Zhu , Xiaojing Chen

In this paper, we give a matrix construction method for designing DNA codes that come from group matrix rings. We show that with our construction one can obtain reversible $G^k$-codes of length $kn,$ where $k, n \in \mathbb{N},$ over the…

Information Theory · Computer Science 2021-08-05 Adrian Korban , Serap Sahinkaya , Deniz Ustun

In this paper, we mainly study the some structure of cyclic DNA codes of odd length over the ring $R = \F_2[u,v]/\langle u^2-1,v^3-v,uv-vu \rangle$ which play an important role in DNA computing. We established a direct link between the…

Information Theory · Computer Science 2015-11-13 Sukhamoy Pattanayak , Abhay Kumar Singh , Pratyush Kumar

In this study we determine the structure of reversible DNA codes obtained from skew cyclic codes. We show that the generators of such DNA codes enjoy some special properties. We study the structural properties of such family of codes and we…

Combinatorics · Mathematics 2017-03-31 Fatmanur Gursoy , Elif Segah Oztas , Irfan Siap

This paper introduces a new family of reconstruction codes which is motivated by applications in DNA data storage and sequencing. In such applications, DNA strands are sequenced by reading some subset of their substrings. While previous…

Information Theory · Computer Science 2022-05-10 Yonatan Yehezkeally , Daniella Bar-Lev , Sagi Marcovich , Eitan Yaakobi

DNA sequences are prone to creating secondary structures by folding back on themselves by non-specific hybridization among its nucleotides. The formation of secondary structures makes the sequences chemically inactive towards synthesis and…

Information Theory · Computer Science 2022-11-30 Siddhartha Siddhiprada Bhoi , Paramapalli Udaya , Abhay Kumar Singh

In this paper, we describe a new type of DNA codes over two noncommutative rings $E$ and $F$ of order four with characteristic 2. Our DNA codes are based on quasi self-dual codes over $E$ and $F$. Using quasi self-duality, we can describe…

Information Theory · Computer Science 2021-05-17 Jon-Lark Kim , Dong Eun Ohk

We give the structure of $\lambda$-constacyclic codes of length $p^sm$ over $R=\mathbb{F}_{p^r}+u \mathbb{F}_{p^r}+...+ u^{e-1}\mathbb{F}_{p^r}$ with $\lambda \in \F_{p^r}^*$. We also give the structure of $\lambda$-constacyclic codes of…

Information Theory · Computer Science 2012-12-03 Kenza Guenda , T. Aaron Gulliver

In this paper, we study skew constacyclic codes over the ring $\mathbb{Z}_{q}R$ where $R=\mathbb{Z}_{q}+u\mathbb{Z}_{q}$, $q=p^{s}$ for a prime $p$ and $u^{2}=0$. We give the definition of these codes as subsets of the ring…

Information Theory · Computer Science 2018-10-16 Ahlem Melakhessou , Nuh Aydin , Kenza Guenda

In modern age, the increasing complexity of computation and communication technology is leading us towards the necessity of new paradigm. As a result, unconventional approach like DNA coding theory is gaining considerable attention. The…

Information Theory · Computer Science 2023-08-07 Mandrita Mondal , Kumar S. Ray

In this paper, we solve the reversibility problem for DNA codes over the non-chain ring $R_{k,s}=\mathbb{F}_{4^{2k}}[u_1,...,u_{s}]/< u_1^2-u_1,..., u_s^2-u_s>$. We define an automorphism $\theta$ over $R_{k,s}$ which help us both find the…

Combinatorics · Mathematics 2021-01-05 Fatmanur Gursoy , Elif Segah Oztas , Bahattin Yildiz

This paper considers a new alphabet set, which is a ring that we call $\mathbb{F}_4R$, to construct linear error-control codes. Skew cyclic codes over the ring are then investigated in details. We define a nondegenerate inner product and…

Information Theory · Computer Science 2021-03-01 Nasreddine Benbelkacem , Martianus Frederic Ezerman , Taher Abualrub , Aicha Batoul

We consider two-dimensional $(\lambda_1, \lambda_2)$-constacyclic codes over $\mathbb{F}_{q}$ of area $M N$, where $q$ is some power of prime $p$ with $\gcd(M,p)=1$ and $\gcd(N,p)=1$. With the help of common zero (CZ) set, we characterize…

Information Theory · Computer Science 2025-12-24 Vidya Sagar , Shikha Patel , Ashutosh Singh , Shayan Srinivasa Garani

Error-correcting codes over sets, with applications to DNA storage, are studied. The DNA-storage channel receives a set of sequences, and produces a corrupted version of the set, including sequence loss, symbol substitution, symbol…

Information Theory · Computer Science 2021-07-12 Hengjia Wei , Moshe Schwartz

Convolutional codes are error-correcting linear codes that utilize shift registers to encode. These codes have an arbitrary block size and they can incorporate both past and current information bits. DNA codes represent DNA sequences and…

Information Theory · Computer Science 2021-11-09 Paridhi Latawa , Nuh Aydin

Let $\mathbb{F}_q$ be a finite field of $q=p^m$ elements where $p$ is a prime and $m$ is a positive integer. This paper considers $(\gamma,\Delta)$-cyclic codes over a class of finite non-chain commutative rings…

Information Theory · Computer Science 2025-02-25 Om Prakash , Shikha Patel , Habibul Islam

Constacyclic codes are important classes of linear codes that have been applied to the construction of quantum codes. Six new families of asymmetric quantum codes derived from constacyclic codes are constructed in this paper. Moreover, the…

Information Theory · Computer Science 2014-04-01 Liqi Wang , Shixin Zhu

To equip DNA-based data storage with random-access capabilities, Yazdi et al. (2018) prepended DNA strands with specially chosen address sequences called primers and provided certain design criteria for these primers. We provide explicit…

Information Theory · Computer Science 2019-01-07 Yeow Meng Chee , Han Mao Kiah , Hengjia Wei