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In this paper, we present a novel design strategy of DNA codes with length $3n$ over the non-chain ring $R=\mathbb{Z}_4+u\mathbb{Z}_4+u^2\mathbb{Z}_4$ with $64$ elements and $u^3=1$, where $n$ denotes the length of a code over $R$. We first…

Information Theory · Computer Science 2022-11-28 Shibsankar Das , Krishna Gopal Benerjee , Adrish Banerjee

In this paper, we study the theory for constructing DNA cyclic codes of odd length over $\Z_4[u]/\langle u^2 \rangle$ which play an important role in DNA computing. Cyclic codes of odd length over $\Z_4 + u \Z_4$ satisfy the reverse…

Information Theory · Computer Science 2015-08-11 Sukhamoy Pattanayak , Abhay Kumar Singh

In this paper, we investigate $\theta$-skew cyclic codes over the ring $R= \mathbb{F}_4 + v \mathbb{F}_4$, where $v^2=v$ and $\theta$ is a non-trivial automorphism over $\mathbb{F}_4 + v \mathbb{F}_4$. This allows us to describe DNA code…

Information Theory · Computer Science 2025-06-03 Joël Kabore , Mohammed Elhassani Charkani

A method to construct and count all the linear codes (of arbitrary length) in $\mathbb{F}_{4}$ that are invariant under reverse permutation and that contain the repetition code is presented. These codes are suitable for constructing DNA…

Information Theory · Computer Science 2025-06-25 E. J. García-Claro

In this paper, we develop the theory for constructing DNA cyclic codes of odd length over $R=\Z_4[u]/\langle u^2-1 \rangle$ based on the deletion distance. Firstly, we relate DNA pairs with a special 16 elements of ring $R$. Cyclic codes of…

Information Theory · Computer Science 2016-03-15 Sukhamoy Pattanayak , Abhay Kumar Singh

In this paper, a unique form of generators of a constacyclic code of arbitrary length over a non-chain ring of the type $\mathtt{R_{_{\theta}}}=Z_{4}+\nu Z_{4}, \nu^{2}=\theta \in Z_{4}+\nu Z_{4}$ has been obtained. Further, rank and…

Commutative Algebra · Mathematics 2024-07-12 Nikita Jain , Sucheta Dutt , Ranjeet Sehmi

We construct codes over the ring $\mathbb{F}_2+u\mathbb{F}_2$ with $u^2=0$. These code are designed for use in DNA computing applications. The codes obtained satisfy the reverse complement constraint, the $GC$ content constraint and avoid…

Information Theory · Computer Science 2012-07-17 Kenza Guenda , T. Aaron Gulliver

For a prime $p$ and a positive integer $m$, let $\mathbb{F}_{p^m}$ be the finite field of characteristic $p$, and $\mathfrak{R}_l:=\mathbb{F}_{p^m}[v]/\langle v^l-v\rangle$ be a non-chain ring. In this paper, we study the…

Information Theory · Computer Science 2023-12-14 Ashutosh Singh , Priyanka Sharma , Om Prakash

In this present work, we generalize the study of construction of DNA codes over the rings $\mathcal{R}_\theta=\mathbb{Z}_4+w\mathbb{Z}_4$, $w^2 = \theta $ for $\theta \in \mathbb{Z}_4+w\mathbb{Z}_4$. Rigorous study along with…

Information Theory · Computer Science 2021-10-19 Adel Alahmadi , Krishna Gopal Benerjee , Sourav Deb , Manish K Gupta

In this paper, we discuss DNA codes that are cyclic or quasi-cyclic over $\Z_{4}+\omega \Z_{4}$, where $\omega^{2}=2+2\omega$ along with methods to construct these with combinatorial constraints. We also generalize results obtained for the…

Information Theory · Computer Science 2021-10-20 Adel Alahmadi , Alaa Altassan , Amani Alyoubi , Manish K. Gupta , Hatoon Shoaib

DNA codes have many applications, such as in data storage, DNA computing, etc. Good DNA codes have large sizes and satisfy some certain constraints. In this paper, we present a new construction method for reversible DNA codes. We show that…

Information Theory · Computer Science 2024-03-19 Xueyan Chen , Whan-Hyuk Choi , Hongwei Liu

DNA codes have garnered significant interest due to their utilization in digital media storage, cryptography, and DNA computing. In this paper, we first extend the results of constructing reversible group codes \cite{Cengellenmis} and…

Information Theory · Computer Science 2024-09-11 Guodong Wang , Hongwei Liu , Xueyan Chen

In this article, we study the algebraic structure of double cyclic codes of length $(m, n)$ over $\mathbb{F}_4$ and we give a necessary and sufficient condition for a double cyclic code over $\mathbb{F}_4$ to be reversible. Also, we…

Rings and Algebras · Mathematics 2025-12-16 Divya Acharya , Prasanna Poojary , Vadiraja Bhatta G. R

DNA strings and their properties are widely studied since last 20 years due to its applications in DNA computing. In this area, one designs a set of DNA strings (called DNA code) which satisfies certain thermodynamic and combinatorial…

Information Theory · Computer Science 2025-10-03 Krishna Gopal Benerjee , Manish K Gupta

In this paper we study the structure of specific linear codes called DNA codes. The first attempts on studying such codes have been proposed over four element rings which are naturally matched with DNA four letters. Later, double (pair) DNA…

Combinatorics · Mathematics 2017-03-31 Fatmanur Gürsoy , Elif Segah Oztas , Irfan Siap

In this work, we study the DNA codes from the ring R = Z4 + wZ4, where w^2 = 2+2w with 16 elements. We establish a one to one correspondence between the elements of the ring R and all the DNA codewords of length 2 by defining a…

Information Theory · Computer Science 2018-01-10 Dixita Limbachiya , Krishna Gopal , Bansari Rao , Manish K. Gupta

In this paper, we construct linear codes over $\mathbb{Z}_4$ with bounded $GC$-content. The codes are obtained using a greedy algorithm over $\mathbb{Z}_4$. Further, upper and lower bounds are derived for the maximum size of DNA codes of…

Information Theory · Computer Science 2015-05-26 Nabil Bennenni , Kenza Guenda , T. Aaron Gulliver

The structures of cyclic DNA codes of odd length over the finite rings R=Z_{4}+wZ_{4}, w^{2}=2 and S=Z_{4}+wZ_{4}+vZ_{4}+wvZ_{4},w^{2}=2,v^{2}=v,wv=vw are studied. The links between the elements of the rings R, S and 16 and 256 codons are…

Information Theory · Computer Science 2018-11-09 Abdullah Dertli , Yasemin Cengellenmis

DNA storage has emerged as an important area of research. The reliability of DNA storage system depends on designing the DNA strings (called DNA codes) that are sufficiently dissimilar. In this work, we introduce DNA codes that satisfy a…

Information Theory · Computer Science 2022-11-28 Krishna Gopal Benerjee , Sourav Deb , Manish K Gupta

This paper is dealing with DNA cyclic codes which play an important role in DNA computing and have attracted a particular attention in the literature. Firstly, we introduce a new family of DNA cyclic codes over the ring…

Information Theory · Computer Science 2015-05-26 Nabil Bennenni , Kenza Guenda , Sihem Mesnager
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