English

Construction of cyclic DNA codes over the Ring $\Z_4[u]/\langle u^2-1 \rangle $ Based on the deletion distance

Information Theory 2016-03-15 v1 math.IT

Abstract

In this paper, we develop the theory for constructing DNA cyclic codes of odd length over R=Z4[u]/u21R=\Z_4[u]/\langle u^2-1 \rangle based on the deletion distance. Firstly, we relate DNA pairs with a special 16 elements of ring RR. Cyclic codes of odd length over RR satisfy the reverse constraint and the reverse-complement constraint are discussed in this paper. We also study the GCGC-content of these codes and their deletion distance. The paper concludes with some examples of cyclic DNA codes with GCGC-content and their respective deletion distance.

Keywords

Cite

@article{arxiv.1603.04055,
  title  = {Construction of cyclic DNA codes over the Ring $\Z_4[u]/\langle u^2-1 \rangle $ Based on the deletion distance},
  author = {Sukhamoy Pattanayak and Abhay Kumar Singh},
  journal= {arXiv preprint arXiv:1603.04055},
  year   = {2016}
}

Comments

15 pages, 3 tables. arXiv admin note: substantial text overlap with arXiv:1508.02015, arXiv:1511.03937