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Adverse drug events (ADEs) are a major safety issue in clinical trials. Thus, predicting ADEs is key to developing safer medications and enhancing patient outcomes. To support this effort, we introduce CT-ADE, a dataset for multilabel ADE…

Computation and Language · Computer Science 2025-03-11 Anthony Yazdani , Alban Bornet , Philipp Khlebnikov , Boya Zhang , Hossein Rouhizadeh , Poorya Amini , Douglas Teodoro

The popularity of dynamic malware analysis has grown significantly, as it enables analysts to observe the behavior of executing samples, thereby enhancing malware detection and classification decisions. With the continuous increase in new…

Cryptography and Security · Computer Science 2023-08-10 Ran Liu , Charles Nicholas

The security of open-source software repositories is increasingly threatened by next-gen software supply chain attacks. These attacks include multiphase malware execution, remote access activation, and dynamic payload generation.…

Cryptography and Security · Computer Science 2026-04-30 Sk Tanzir Mehedi , Raja Jurdak , Chadni Islam , Abu Bakar Siddique Mahi , Gowri Ramachandran

Timely and accurate extraction of Adverse Drug Events (ADE) from biomedical literature is paramount for public safety, but involves slow and costly manual labor. We set out to improve drug safety monitoring (pharmacovigilance, PV) through…

A deviation detection aims to detect deviating process instances, e.g., patients in the healthcare process and products in the manufacturing process. A business process of an organization is executed in various contextual situations, e.g.,…

Artificial Intelligence · Computer Science 2022-11-01 Gyunam Park , Janik-Vasily Benzin , Wil M. P. van der Aalst

Drug-side effect research is vital for understanding adverse reactions arising in complex multi-drug therapies. However, the scarcity of higher-order datasets that capture the combinatorial effects of multiple drugs severely limits progress…

Machine Learning · Computer Science 2025-02-11 Zhaoying Wang , Yingdan Shi , Xiang Liu , Can Chen , Jun Wen , Ren Wang

Rule-based IDS (intrusion detection systems) are being replaced by more robust neural IDS, which demonstrate great potential in the field of Cybersecurity. However, these ML approaches continue to rely on ad-hoc feature engineering…

Artificial Intelligence · Computer Science 2021-08-30 Andrew Golczynski , John A. Emanuello

We present MRPC, an R package that learns causal graphs with improved accuracy over existing packages, such as pcalg and bnlearn. Our algorithm builds on the powerful PC algorithm, the canonical algorithm in computer science for learning…

Machine Learning · Statistics 2018-06-07 Md. Bahadur Badsha , Evan A Martin , Audrey Qiuyan Fu

An adverse drug effect (ADE) is any harmful event resulting from medical drug treatment. Despite their importance, ADEs are often under-reported in official channels. Some research has therefore turned to detecting discussions of ADEs in…

Computation and Language · Computer Science 2024-07-03 Dorothea MacPhail , David Harbecke , Lisa Raithel , Sebastian Möller

Spontaneous reporting systems (SRS) have been developed to collect adverse event records that contain personal demographics and sensitive information like drug indications and adverse reactions. The release of SRS data may disclose the…

Cryptography and Security · Computer Science 2022-11-22 Yi-Yuang Wu , Zhi-Xun Shen , Wen-Yang Lin

Adverse drug events (ADEs) are an important aspect of drug safety. Various texts such as biomedical literature, drug reviews, and user posts on social media and medical forums contain a wealth of information about ADEs. Recent studies have…

Computation and Language · Computer Science 2024-05-21 Shaoxiong Ji , Ya Gao , Pekka Marttinen

This research focused on enhancing post-incident malware forensic investigation using reinforcement learning RL. We proposed an advanced MDP post incident malware forensics investigation model and framework to expedite post incident…

Cryptography and Security · Computer Science 2025-01-08 Dipo Dunsin , Mohamed Chahine Ghanem , Karim Ouazzane , Vassil Vassilev

Molecular dynamics (MD) simulations play a crucial role in resolving the underlying conformational dynamics of molecular systems. However, their capability to correctly reproduce and predict dynamics in agreement with experiments is limited…

Chemical Physics · Physics 2025-05-19 Ivan Gilardoni , Valerio Piomponi , Thorben Fröhlking , Giovanni Bussi

Adverse Drug Event (ADE) extraction models can rapidly examine large collections of social media texts, detecting mentions of drug-related adverse reactions and trigger medical investigations. However, despite the recent advances in NLP, it…

Computation and Language · Computer Science 2021-09-27 Simone Scaboro , Beatrice Portelli , Emmanuele Chersoni , Enrico Santus , Giuseppe Serra

SDRcausal is a package that implements sufficient dimension reduction methods for causal inference as proposed in Ghosh, Ma, and de Luna (2021). The package implements (augmented) inverse probability weighting and outcome regression…

Computation · Statistics 2021-05-07 Mohammad Ghasempour , Xavier de Luna

Many studies employ the analysis of time-to-event data that incorporates competing risks and right censoring. Most methods and software packages are geared towards analyzing data that comes from a continuous failure time distribution.…

Methodology · Statistics 2025-06-06 Tomer Meir , Malka Gorfine

Adversarial poisoning attacks pose huge threats to various machine learning applications. Especially, the recent accumulative poisoning attacks show that it is possible to achieve irreparable harm on models via a sequence of imperceptible…

Machine Learning · Computer Science 2023-06-07 Jianing Zhu , Xiawei Guo , Jiangchao Yao , Chao Du , Li He , Shuo Yuan , Tongliang Liu , Liang Wang , Bo Han

A Self modifying code is code that modifies its own instructions during execution time. It is nowadays widely used, especially in malware to make the code hard to analyse and to detect by anti-viruses. Thus, the analysis of such self…

Formal Languages and Automata Theory · Computer Science 2019-09-30 Tayssir Touili , Xin Ye

Time-to-event (survival) analysis models the time until a pre-specified event occurs. When time is measured in discrete units or rounded into intervals, standard continuous-time models can yield biased estimators. In addition, the event of…

Machine Learning · Statistics 2025-11-19 Tomer Meir , Rom Gutman , Malka Gorfine

An early warning of future system failure is essential for conducting predictive maintenance and enhancing system availability. This paper introduces a three-step framework for assessing system health to predict imminent system breakdowns.…

Machine Learning · Computer Science 2024-11-26 Hao Zhao , Rong Pan