Related papers: Constructing $k$-ary Orientable Sequences with Asy…
The run vector of a binary sequence reflects the run structure of the sequence, which is given by the set of all substrings of the run length encoding. The run vector and the aperiodic autocorrelations of a binary sequence are strongly…
In this paper, we construct several infinite families of $q$-ary constacyclic codes over a finite field $\mathbb{F}_q$ with length $n$, dimension around $n/2$, and minimum distance at least $cn/\log_q n$ for some positive constant $c$. They…
Phylogenetic networks provide a more general description of evolutionary relationships than rooted phylogenetic trees. One way to produce a phylogenetic network is to randomly place $k$ arcs between the edges of a rooted binary phylogenetic…
Let $G=(V, E)$ be an undirected $n$-vertices $m$-edges graph with non-negative edge weights. In this paper, we present three new algorithms for constructing a $(2k-1)$-stretch distance oracle with $O(n^{1+\frac{1}{k}})$ space. The first…
We present sublinear-time (randomized) algorithms for finding simple cycles of length at least $k\geq 3$ and tree-minors in bounded-degree graphs. The complexity of these algorithms is related to the distance of the graph from being…
We study the problem of optimal leader selection in consensus networks under two performance measures (1) formation coherence when subject to additive perturbations, as quantified by the steady-state variance of the deviation from the…
Most research on query optimization has centered on binary join algorithms like hash join and sort-merge join. However, recent years have seen growing interest in theoretically optimal algorithms, notably Yannakakis' algorithm. These…
Given an undirected graph $G$ with $m$ edges, $n$ vertices, and non-negative edge weights, and given an integer $k\geq 1$, we show that for some universal constant $c$, a $(2k-1)$-approximate distance oracle for $G$ of size $O(kn^{1 +…
The linear complexity and k-error linear complexity of a sequence have been used as important measures of keystream strength, hence designing a sequence with high linear complexity and $k$-error linear complexity is a popular research topic…
In this paper we define a new problem, motivated by computational biology, $LCSk$ aiming at finding the maximal number of $k$ length $substrings$, matching in both input strings while preserving their order of appearance. The traditional…
The linear complexity of a sequence has been used as an important measure of keystream strength, hence designing a sequence which possesses high linear complexity and $k$-error linear complexity is a hot topic in cryptography and…
We propose a novel approach to solve K-adaptability problems with convex objective and constraints and integer first-stage decisions. A logic-based Benders decomposition is applied to handle the first-stage decisions in a master problem,…
We construct a family of linear maximally recoverable codes with locality $r$ and dimension $r+1.$ For codes of length $n$ with $r\approx n^\alpha, 0\le\alpha\le 1$ the code alphabet is of the order $n^{1+3\alpha},$ which improves upon the…
We present a family of automata networks that solve the k-parity problem when run in parallel. These solutions are constructed by connecting cliques in a non-cyclical fashion. The size of the local neighbourhood is linear in the size of the…
We present the first fixed-parameter algorithm for constructing a tree-child phylogenetic network that displays an arbitrary number of binary input trees and has the minimum number of reticulations among all such networks. The algorithm…
We revisit the complexity of approximate pattern matching in an elastic-degenerate string. Such a string is a sequence of $n$ finite sets of strings of total length $N$, and compactly describes a collection of strings obtained by first…
Recently, Han obtained two hook length formulas for binary trees and asked for combinatorial proofs. One of Han's formulas has been generalized to k-ary trees by Yang. Sagan has found a probabilistic proof of Yang's extension. We give…
This paper presents a novel approach to address the constrained coding challenge of generating almost-balanced sequences. While strictly balanced sequences have been well studied in the past, the problem of designing efficient algorithms…
We consider the longest common subsequence (LCS) problem with the restriction that the common subsequence is required to consist of at least $k$ length substrings. First, we show an $O(mn)$ time algorithm for the problem which gives a…
We study the class of networks which can be created in polylogarithmic parallel time by network constructors: groups of anonymous agents that interact randomly under a uniform random scheduler with the ability to form connections between…