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The $n$th term of an automatic sequence is the output of a deterministic finite automaton fed with the representation of $n$ in a suitable numeration system. In this paper, instead of considering automatic sequences built on a numeration…
In this paper, we design a framework to obtain efficient algorithms for several problems with a global constraint (acyclicity or connectivity) such as Connected Dominating Set, Node Weighted Steiner Tree, Maximum Induced Tree, Longest…
In this paper we study pseudorandomness of a family of sequences in terms of two measures, the family complexity ($f$-complexity) and the cross-correlation measure of order $\ell$. We consider sequences not only on binary alphabet but also…
Building on previous work by Cameron et al. in [3], we give a recurrence for computing the number of acyclic orientations of complete $k$-partite graphs, which can be implemented to obtain a dynamic programming algorithm running in time…
Palindromes are strings that read the same forward and backward. Problems of computing palindromic structures in strings have been studied for many years with a motivation of their application to biology. The longest palindrome problem is…
The classical way of extending an $[n, k, d]$ linear code $\C$ is to add an overall parity-check coordinate to each codeword of the linear code $\C$. This extended code, denoted by $\overline{\C}(-\bone)$ and called the standardly extended…
Nine new 2-D OOCs are presented here, all sharing the common feature of a code size that is much larger in relation to the number of time slots than those of constructions appearing previously in the literature. Each of these constructions…
In this paper we study complexity of an extension of ordered binary decision diagrams (OBDDs) called $c$-OBDDs on CNFs of bounded (primal graph) treewidth. In particular, we show that for each $k$ there is a class of CNFs of treewidth $k…
Clustering serves as a vital tool for uncovering latent data structures, and achieving both high accuracy and interpretability is essential. To this end, existing methods typically construct binary decision trees by solving mixed-integer…
An upward drawing of a tree is a drawing such that no parents are below their children. It is order-preserving if the edges to children appear in prescribed order around each node. Chan showed that any tree has an upward order-preserving…
We study the duplication with transposition distance between strings of length $n$ over a $q$-ary alphabet and their roots. In other words, we investigate the number of duplication operations of the form $x = (abcd) \to y = (abcbd)$, where…
The connection between the maximum spanning tree in a directed graph and the best dependency tree of a sentence has been exploited by the NLP community. However, for many dependency parsing schemes, an important detail of this approach is…
We analyze the connection between the autocorrelation of a binary sequence and its run structure given by the run length encoding. We show that both the periodic and the aperiodic autocorrelation of a binary sequence can be formulated in…
A string $S[1,n]$ is a power (or tandem repeat) of order $k$ and period $n/k$ if it can decomposed into $k$ consecutive equal-length blocks of letters. Powers and periods are fundamental to string processing, and algorithms for their…
Locally repairable codes with locality $r$ ($r$-LRCs for short) were introduced by Gopalan et al. \cite{1} to recover a failed node of the code from at most other $r$ available nodes. And then $(r,\delta)$ locally repairable codes…
Datacenter networks are becoming increasingly flexible with the incorporation of new networking technologies, such as optical circuit switches. These technologies allow for programmable network topologies that can be reconfigured to better…
The neighbor-joining algorithm is a popular phylogenetics method for constructing trees from dissimilarity maps. The neighbor-net algorithm is an extension of the neighbor-joining algorithm and is used for constructing split networks. We…
In the \emph{$k$-Diameter-Optimally Augmenting Tree Problem} we are given a tree $T$ of $n$ vertices as input. The tree is embedded in an unknown \emph{metric} space and we have unlimited access to an oracle that, given two distinct…
We present an algorithm for building probabilistic rule lists that is two orders of magnitude faster than previous work. Rule list algorithms are competitors for decision tree algorithms. They are associative classifiers, in that they are…
In this paper, we construct a new family of distance-optimal binary cyclic codes with the minimum distance $6$ and a new family of distance-optimal quaternary cyclic codes with the minimum distance $4$. We also construct several families of…