Related papers: Constructing $k$-ary Orientable Sequences with Asy…

A simple graph G is k-ordered (respectively, k-ordered hamiltonian) if, for any sequence of k distinct vertices v_1, ..., v_k of G, there exists a cycle (respectively, a hamiltonian cycle) in G containing these k vertices in the specified…

A $k$-ary charm bracelet is an equivalence class of length $n$ strings with the action on the indices by the additive group of the ring of integers modulo $n$ extended by the group of units. By applying an $O(n^3)$ amortized time algorithm…

This paper defines multidimensional sequential optimization numbers and prove that the unsigned Stirling numbers of first kind are 1-dimensional sequential optimization numbers. This paper gives a recurrence formula and an upper bound of…

Cyclic codes are the most studied subclass of linear codes and widely used in data storage and communication systems. Many cyclic codes have optimal parameters or the best parameters known. They are divided into simple-root cyclic codes and…

We suggest a new non-recursive algorithm for constructing a binary search tree given an array of numbers. The algorithm has $O(N)$ time and $O(1)$ memory complexity if the given array of $N$ numbers is sorted. The resulting tree is of…

We study codes that can correct backtracking errors during nanopore sequencing. In this channel, a sequence of length $n$ over an alphabet of size $q$ is being read by a sliding window of length $\ell$, where from each window we obtain only…

A Barker sequence is a binary sequence for which all nontrivial aperiodic autocorrelations are either 0, 1 or -1. The only known Barker sequences have length 2, 3, 4, 5, 7, 11 or 13. It is an old conjecture that no longer Barker sequences…

We present sufficient conditions for when an ordering of universal cycles $\alpha_1, \alpha_2, \ldots, \alpha_m$ for disjoint sets $\mathbf{S}_1, \mathbf{S}_2, \ldots , \mathbf{S}_m$ can be concatenated together to obtain a universal cycle…

We introduce a subfamily of skew Dyck paths called box paths and show that they are in bijection with pairs of ternary trees, confirming an observation stated previously on the On-Line Encyclopedia of Integer Sequences. More generally, we…

For positive integers $k,n$, a de Bruijn sequence $B(k,n)$ is a finite sequence of elements drawn from $k$ characters whose subwords of length $n$ are exactly the $k^n$ words of length $n$ on $k$ characters. This paper introduces the…

Thin spanning trees lie at the intersection of graph theory, approximation algorithms, and combinatorial optimization. They are central to the long-standing \emph{thin tree conjecture}, which asks whether every $k$-edge-connected graph…

In this paper we study a variation of the accessibility percolation model, this is also motivated by evolutionary biology and evolutionary computation. Consider a tree whose vertices are labeled with random numbers. We study the probability…

The Path Contraction and Cycle Contraction problems take as input an undirected graph $G$ with $n$ vertices, $m$ edges and an integer $k$ and determine whether one can obtain a path or a cycle, respectively, by performing at most $k$ edge…

k-means is a widely used clustering algorithm, but for $k$ clusters and a dataset size of $N$, each iteration of Lloyd's algorithm costs $O(kN)$ time. Although there are existing techniques to accelerate single Lloyd iterations, none of…

We generalize the notion of linear chord diagrams to the case of matched sets of size $k$, which we call $k$-chord diagrams. We provide formal generating functions and recurrence relations enumerating these $k$-chord diagrams by the number…

In the $(k,m)$-mappability problem, for a given sequence $T$ of length $n$, the goal is to compute a table whose $i$th entry is the number of indices $j \ne i$ such that the length-$m$ substrings of $T$ starting at positions $i$ and $j$…

Aperiodic autocorrelation is an important indicator of performance of sequences used in communications, remote sensing, and scientific instrumentation. Knowing a sequence's autocorrelation function, which reports the autocorrelation at…

Let us call a sequence of numbers heapable if they can be sequentially inserted to form a binary tree with the heap property, where each insertion subsequent to the first occurs at a leaf of the tree, i.e. below a previously placed number.…

Classic cycle-joining techniques have found widespread application in creating universal cycles for a diverse range of combinatorial objects, such as shorthand permutations, weak orders, orientable sequences, and various subsets of $k$-ary…

This study focuses on efficient schemes for enumerative coding of $\sigma$--ary sequences by mainly borrowing ideas from \"Oktem & Astola's \cite{Oktem99} hierarchical enumerative coding and Schalkwijk's \cite{Schalkwijk72} asymptotically…