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Phosphatidylserine (PS) is a negatively-charged glycerophospholipid found mainly in the plasma membrane (PM) and in the late secretory/endocytic compartments, where it regulates cellular activity and can mediate apoptosis. Export of PS from…

Subcellular Processes · Quantitative Biology 2023-11-10 Alenka {Č}opi{č} , Thibaud Dieudonné , Guillaume Lenoir

Acetylene, among the multitude of organic molecules discovered in space, plays a distinct role in the genesis of organic matter. Characterized by its unique balance of stability and reactivity, acetylene is the simplest unsaturated organic…

Astrophysics of Galaxies · Physics 2024-05-06 E. O. Pentsak , M. S. Murga , V. P. Ananikov

Functional-structural plant models (FSPM) replicate plants' responses to their environment and are useful for predicting behavior in a changing climate. However, they rely on detailed measurements of traits, which are difficult to collect…

Conservation science depends on an accurate understanding of what's happening in a given ecosystem. How many species live there? What is the makeup of the population? How is that changing over time? Species Distribution Modeling (SDM) seeks…

Machine Learning · Computer Science 2021-07-23 Sara Beery , Elijah Cole , Joseph Parker , Pietro Perona , Kevin Winner

We propose dynamical systems trees (DSTs) as a flexible class of models for describing multiple processes that interact via a hierarchy of aggregating parent chains. DSTs extend Kalman filters, hidden Markov models and nonlinear dynamical…

Machine Learning · Computer Science 2012-07-19 Andrew Howard , Tony S. Jebara

The collection of wild larvae seed as a source of raw material is a major sub industry of shellfish aquaculture. To predict when, where and in what quantities wild seed will be available, it is necessary to track the appearance and growth…

Artificial Intelligence · Computer Science 2007-05-23 Vitorino Ramos , Jonathan Campbell , John Slater , John Gillespie , Ivan F. Bendezu , Fionn Murtagh

By studying the literature about Tetracyclines (TCs), it becomes clearly evident that TCs are very dynamic molecules. In some cases, their structure-activity-relationship (SAR) are known, especially against bacteria, while against other…

Biomolecules · Quantitative Biology 2012-06-13 Domenico Fuoco

Plants are fundamentally important to life. Key research areas in plant science include plant species identification, weed classification using hyper spectral images, monitoring plant health and tracing leaf growth, and the semantic…

Computer Vision and Pattern Recognition · Computer Science 2020-09-15 K. K. Thyagharajan , I. Kiruba Raji

The collection of ecological data in the field is essential to diagnose, monitor and manage ecosystems in a sustainable way. Since acquisition of this information through traditional methods are generally time-consuming, due to the…

Computer Vision and Pattern Recognition · Computer Science 2024-01-12 Ion Ciobotari , Adriana Príncipe , Maria Alexandra Oliveira , João Nuno Silva

Lateral gene transfer (LGT) is a common mechanism of non-vertical evolution where genetic material is transferred between two more or less distantly related organisms. It is particularly common in bacteria where it contributes to adaptive…

Probability · Mathematics 2012-06-18 Sebastien Roch , Sagi Snir

Recent experimental results showing untypical nonlinear absorption and marked deviations from well known universality in the low temperature acoustic and dielectric losses in amorphous solids prove the need for improving the understanding…

Disordered Systems and Neural Networks · Physics 2018-07-20 Moshe Schechter , Peter Nalbach , Alexander L. Burin

Obesity is a global health concern associated with high morbidity and mortality. Therapeutic strategies include synthetic drugs and surgery, which may entail high costs and serious complications. Plant-based medicinal agents offer an…

Other Quantitative Biology · Quantitative Biology 2012-08-10 Mahnaz Kazemipoor , Che Wan Jasimah Wan Mohamed Radzi , Geoffrey A. Cordell , Iman Yaze

Transmission spectroscopy is a key avenue for the near-term study of small-planet atmospheres and the most promising method when it comes to searching for atmospheres on temperate rocky worlds, which are often too cold for planetary…

Instrumentation and Methods for Astrophysics · Physics 2025-08-28 Caroline Piaulet-Ghorayeb

After evaporation of the organic solvents, benzene, toluene, and cyclohexane on gold substrates, Scanning Tunneling Microscope (STM) shows the presence of a remaining adsorbed layer. The different solvent molecules were individually…

Recently there has been a lot of interest in identifying modules at the level of genetic and metabolic networks of organisms, as well as in identifying single genes and reactions that are essential for the organism. A goal of computational…

Molecular Networks · Quantitative Biology 2007-05-23 Areejit Samal , Shalini Singh , Varun Giri , Sandeep Krishna , N. Raghuram , Sanjay Jain

Magnetic resonance spectroscopy (MRS) allows the analysis of biochemical processes non invasively and in vivo. Still, its application in clinical diagnostics is rare. Routine MRS is limited to spatial, chemical and temporal resolutions of…

Chemical Physics · Physics 2020-10-05 Andrey N. Pravdivtsev , Frank D. Sönnichsen , Jan-Bernd Hövener

Latent tree analysis seeks to model the correlations among a set of random variables using a tree of latent variables. It was proposed as an improvement to latent class analysis --- a method widely used in social sciences and medicine to…

Machine Learning · Computer Science 2016-10-04 Nevin L. Zhang , Leonard K. M. Poon

The concept of allostery in which macromolecules switch between two different conformations is a central theme in biological processes ranging from gene regulation to cell signaling to enzymology. Allosteric enzymes pervade metabolic…

Subcellular Processes · Quantitative Biology 2017-01-17 Tal Einav , Linas Mazutis , Rob Phillips

We analyze response of a macromolecule near to a substrate; the substrate is tiled in the sequential and specific manner so that repeat units of the macromolecule may have different response on its adsorption in different directions onto…

Soft Condensed Matter · Physics 2020-09-21 Pramod Kumar Mishra

Synthetic lethality, the finding that the simultaneous knockout of two or more individually non-essential genes leads to cell or organism death, has offered a systematic framework to explore cellular function, and also offered therapeutic…

Neurons and Cognition · Quantitative Biology 2019-07-29 Emma K. Towlson , Albert-László Barabási