Related papers: Plant sesquiterpene lactones
Whether live cell membranes show miscibility phase transitions (MPTs), and if so, how they fluctuate near the transitions remain outstanding unresolved issues in physics and biology alike. Motivated by these questions we construct a generic…
Statistical learning (SL) includes methods that extract knowledge from complex data. SL methods beyond generalized linear models are being increasingly implemented in public health research and epidemiology because they can perform better…
Aligning multiple protein structures can yield valuable information about structural similarities among related proteins, as well as provide insight into evolutionary relationships between proteins in a family. We have developed an…
Bi-directional LSTMs are a powerful tool for text representation. On the other hand, they have been shown to suffer various limitations due to their sequential nature. We investigate an alternative LSTM structure for encoding text, which…
Studying particle-laden flows is essential to understand diverse physical processes such as rain formation in clouds, pathogen transmission, and pollutant dispersal. Distinct clustering patterns are formed in such flows with particles of…
A series of ten plant species belonging to Magnoliopsida - Dicotyledons class were analyzed in terms of chemical compounds distribution of abundance, starting from the assumption that these distributions should give a picture of…
Recent genomic analyses on the cellular metabolic network show that reaction flux across enzymes are diverse and exhibit power-law behavior in its distribution. While one may guess that the reactions with larger fluxes are more likely to be…
Plants have developed intricate mechanisms to adapt to changing light conditions. Besides photo- and helio- tropism -- the differential growth towards light and the diurnal motion with respect to sunlight -- chloroplast motion acts as a…
The study of biological cells in terms of mesoscopic, nonequilibrium, nonlinear, stochastic dynamics of open chemical systems provides a paradigm for other complex, self-organizing systems with ultra-fast stochastic fluctuations, short-time…
Temporal Logic (TL), especially Signal Temporal Logic (STL), enables precise formal specification, making it widely used in cyber-physical systems such as autonomous driving and robotics. Automatically transforming NL into STL is an…
The late stages of stellar evolution from asymptotic giant branch stars to planetary nebulae are now known to be an active phase of molecular synthesis. Over 80 gas-phase molecules have been detected through rotational transitions in the…
The aim of this paper is to provide a construction of stationary discrete solitons in an extended one-dimensional Discrete NLS model with non-nearest neighbour interactions. These models, models of the type with long-range interactions were…
We describe a 3D percolation-type approach to modeling of the processes of aging and certain other properties of tissues analyzed as systems consisting of interacting cells. Lattice sites are designated as regular (healthy) cells, senescent…
The fundamental principles underlying the arrangement of elements into solid compounds with an enormous variety of crystal structures are still largely unknown. This study presents a general overview of the structure types appearing in an…
We produce families of two-dimensional gap solitons (GSs) maintained by moir\'{e} lattices (MLs) composed of linear and nonlinear sublattices, with the defocusing sign of the nonlinearity. Depending on the angle between the sublattices, the…
Flux analysis is a class of constraint-based approaches to the study of biochemical reaction networks: they are based on determining the reaction flux configurations compatible with given stoichiometric and thermodynamic constraints. One of…
Natural decomposition of organic matter is essential in food systems, and compost is used worldwide as an organic fermented fertilizer. However, as a feature of the ecosystem, its effects on the animals are poorly understood. Here we show…
Self-supervised learning (SSL) is attractive for plant disease detection as it can exploit large collections of unlabeled leaf images, yet most existing SSL methods are built on CNNs or vision transformers that are poorly matched to…
The condensation of biomolecules into biomolecular condensates via liquid-liquid phase separation (LLPS) is a ubiquitous mechanism that drives cellular organization. To enable these functions, biomolecules have evolved to drive LLPS and…
Natural organisms such as photosynthetic bacteria, algae, and plants employ complex molecular machinery to convert solar energy into biochemical fuel. An important common feature shared by most of these photosynthetic organisms is that they…