Related papers: Classification of normal phylogenetic varieties fo…

We show that the usual Hodge conjecture implies the general Hodge conjecture for certain abelian varieties of type III, and use this to deduce the general Hodge conjecture for all powers of certain 4-dimensional abelian varieties of type…

Statistical models of evolution are algebraic varieties in the space of joint probability distributions on the leaf colorations of a phylogenetic tree. The phylogenetic invariants of a model are the polynomials which vanish on the variety.…

We give characterizations for the parabolicity of regular trees.

Evolutionary events such as incomplete lineage sorting and lateral gene transfer constitute major problems for inferring species trees from gene trees, as they can sometimes lead to gene trees which conflict with the underlying species…

Let X,Y be projective schemes over a discrete valuation ring R, where Y is generically smooth and g:X \to Y a surjective R-morphism such that g_*\mathcal{O}_X = \mathcal{O}_Y. We show that if the family X \to Spec(R) is isotrivial, then the…

Staged tree models are a discrete generalization of Bayesian networks. We show that these form curved exponential families and derive their natural parameters, sufficient statistic, and cumulant-generating function as functions of their…

We study the homotopy category $\mathsf{K}_{N}(\mathcal{B})$ of $N$-complexes of an additive category $\mathcal{B}$ and the derived category $\mathsf{D}_{N}(\mathcal{A})$ of an abelian category $\mathcal{A}$. First we show that both…

We generalize a result of Popa-Schnell and show that the isogeny class of the Picard variety is twisted derived invariant. Using this, we prove that any twisted Fourier-Mukai partner of an abelian variety is an abelian variety. We then…

Let $X/K$ be a variety over a field, and $A/K$ an abelian variety. A regular homomorphism to $A$ (in codimension $i$) induces, for every smooth geometrically connected pointed $K$-scheme $(T,t_0)$ and every cycle class $Z \in CH^i(T\times…

Let $A$ be an abelian variety in a field of characteristic $0$. We prove that the expansion of $A$ by a generic divisible subgroup of $A$ with the same torsion exists provided $A$ has few algebraic endomorphisms, namely…

Consider the algebraic dynamics on a torus T=G_m^n given by a matrix M in GL_n(Z). Assume that the characteristic polynomial of M is prime to all polynomials X^m-1. We show that any finite equivariant map from another algebraic dynamics…

We determine which complex abelian varieties can be realized as the automorphism group of a smooth projective variety.

The strand symmetric model is a phylogenetic model designed to reflect the symmetry inherent in the double-stranded structure of DNA. We show that the set of known phylogenetic invariants for the general strand symmetric model of the three…

In this paper we investigate hereditarily normal topological groups and their subspaces. We prove that every compact subspace of a hereditarily normal topological group is metrizable. To prove this statement we first show that a…

We show that any normal algebraic monoid is an extension of an abelian variety by a normal affine algebraic monoid. This extends (and builds on) Chevalley's structure theorem for algebraic groups.

Associated to an abelian variety over a number field are several interesting and related groups: the motivic Galois group, the Mumford-Tate group, $\ell$-adic monodromy groups, and the Sato-Tate group. Assuming the Mumford-Tate conjecture,…

We investigate projective varieties which are geometric models of binary symmetric phylogenetic 3-valent trees. We prove that these varieties have Gorenstein terminal singularities (with small resolution) and they are Fano varieties of…

We prove that the set of non-degenerate second order maximally superintegrable systems in the complex Euclidean plane carries a natural structure of a projective variety, equipped with a linear isometry group action. This is done by…

Let $G$ be a complex quasi-simple algebraic group and $G/P$ be a partial flag variety. The projections of Richardson varieties from the full flag variety form a stratification of $G/P$. We show that the closure partial order of projected…

We introduce some new symmetric tensor categories based on the combinatorics of trees: a discrete family $\mathcal{D}(n)$, for $n \ge 3$ an integer, and a continuous family $\mathcal{C}(t)$, for $t \ne 1$ a complex number. The construction…