On phylogenetic trees - a geometer's view
Algebraic Geometry
2007-05-23 v1 Populations and Evolution
Abstract
We investigate projective varieties which are geometric models of binary symmetric phylogenetic 3-valent trees. We prove that these varieties have Gorenstein terminal singularities (with small resolution) and they are Fano varieties of index 4. Moreover any two such varieties associated to trees with the same number of leaves are deformation equivalent, that is, they are in the same connected component of the Hilbert scheme of the projective space. As an application we provide a simple formula for computing their Hilbert-Ehrhard polynomial.
Cite
@article{arxiv.math/0601357,
title = {On phylogenetic trees - a geometer's view},
author = {Weronika Buczynska and Jaroslaw A. Wisniewski},
journal= {arXiv preprint arXiv:math/0601357},
year = {2007}
}
Comments
44 pages, 1 figure