English

Phylogenetic toric varieties on graphs

Algebraic Geometry 2010-11-23 v2

Abstract

We define phylogenetic projective toric model of a trivalent graph as a generalization of a binary symmetric model of a trivalent phylogenetic tree. Generators of the pro- jective coordinate ring of the models of graphs with one cycle are explicitly described. The phylogenetic models of graphs with the same topological invariants are deforma- tion equivalent and share the same Hilbert function. We also provide an algorithm to compute the Hilbert function.

Keywords

Cite

@article{arxiv.1004.1183,
  title  = {Phylogenetic toric varieties on graphs},
  author = {Weronika Buczyńska},
  journal= {arXiv preprint arXiv:1004.1183},
  year   = {2010}
}

Comments

36 pages, improved exposition

R2 v1 2026-06-21T15:07:44.215Z