Phylogenetic toric varieties on graphs
Algebraic Geometry
2010-11-23 v2
Abstract
We define phylogenetic projective toric model of a trivalent graph as a generalization of a binary symmetric model of a trivalent phylogenetic tree. Generators of the pro- jective coordinate ring of the models of graphs with one cycle are explicitly described. The phylogenetic models of graphs with the same topological invariants are deforma- tion equivalent and share the same Hilbert function. We also provide an algorithm to compute the Hilbert function.
Cite
@article{arxiv.1004.1183,
title = {Phylogenetic toric varieties on graphs},
author = {Weronika Buczyńska},
journal= {arXiv preprint arXiv:1004.1183},
year = {2010}
}
Comments
36 pages, improved exposition