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Comparative analysis of scalar fields is an important problem with various applications including feature-directed visualization and feature tracking in time-varying data. Comparing topological structures that are abstract and succinct…

Graphics · Computer Science 2024-06-06 Raghavendra Sridharamurthy , Vijay Natarajan

We investigate properties of the correlation function of clusters of galaxies using geometrical models. On small scales the correlation function depends on the shape and the size of superclusters. On large scales it describes the geometry…

Astrophysics · Physics 2015-06-24 J. Einasto , M. Einasto , P. Frisch , S. Gottlöber , V. Müller , V. Saar , A. A. Starobinsky , D. Tucker

In order to conduct a statistical analysis on a given set of phylogenetic gene trees, we often use a distance measure between two trees. In a statistical distance-based method to analyze discordance between gene trees, it is a key to decide…

Populations and Evolution · Quantitative Biology 2016-02-05 Jing Xi , Jin Xie , Ruriko Yoshida

We investigate the statistics of trees grown from some initial tree by attaching links to preexisting vertices, with attachment probabilities depending only on the valence of these vertices. We consider the asymptotic mass distribution that…

Statistical Mechanics · Physics 2007-05-23 François David , Philippe Di Francesco , Emmanuel Guitter , Thordur Jonsson

Many fundamental statistical methods have become critical tools for scientific data analysis yet do not scale tractably to modern large datasets. This paper will describe very recent algorithms based on computational geometry which have…

There is given a characterization of the geometric distribution by the independence of linear forms with random coefficients. The result is a discrete analog of the corresponding theorem on exponential distribution. The property of linear…

Probability · Mathematics 2022-10-05 Lev Klebanov

Estimating phylogenetic trees is an important problem in evolutionary biology, environmental policy and medicine. Although trees are estimated, their uncertainties are discarded by mathematicians working in tree space. Here we explicitly…

Methodology · Statistics 2017-10-16 Amy D. Willis , Rayna C. Bell

Gene genealogies are frequently studied by measuring properties such as their height ($H$), length ($L$), sum of external branches ($E$), sum of internal branches ($I$), and mean of their two basal branches ($B$), and the coalescence times…

Populations and Evolution · Quantitative Biology 2022-05-24 Egor Alimpiev , Noah A Rosenberg

Based on solid theoretical foundations, we present strong evidences that a number of real-life networks, taken from different domains like Internet measurements, biological data, web graphs, social and collaboration networks, exhibit…

Social and Information Networks · Computer Science 2014-02-24 Muad Abu-Ata , Feodor F. Dragan

The value proposition of a dataset often resides in the implicit interconnections or explicit relationships (patterns) among individual entities, and is often modeled as a graph. Effective visualization of such graphs can lead to key…

Databases · Computer Science 2017-02-14 Yang Zhang , Yusu Wang , Srinivasan Parthasarathy

We introduce and analyze a class of growing geometric random graphs that are invariant under rescaling of space and time. Directed connections between nodes are drawn according to influence zones that depend on node position in space and…

Physics and Society · Physics 2016-03-23 Zheng Xie , Tim Rogers

The properties of scale-free random trees are investigated using both preconditioning on non-extinction and fixed size averages, in order to study the thermodynamic limit. The scaling form of volume probability is found, the connectivity…

Other Condensed Matter · Physics 2009-11-10 Luca Donetti , Claudio Destri

Phylogenetic trees are the fundamental mathematical representation of evolutionary processes in biology. They are also objects of interest in pure mathematics, such as algebraic geometry and combinatorics, due to their discrete geometry.…

Metric Geometry · Mathematics 2022-07-01 Anthea Monod , Bo Lin , Ruriko Yoshida , Qiwen Kang

Not a matter of serious contention, Pearson's correlation coefficient is still the most important statistical association measure. Restricted to just two variables, this measure sometimes doesn't live up to users' needs and expectations.…

Mathematical Finance · Quantitative Finance 2024-02-02 Reza Salimi , Kamran Pakizeh

We present Collaborative Trees, a novel tree model designed for regression prediction, along with its bagging version, which aims to analyze complex statistical associations between features and uncover potential patterns inherent in the…

Methodology · Statistics 2024-05-21 Chien-Ming Chi

The accurate classification of galaxies in large-sample astrophysical databases of galaxy clusters depends sensitively on the ability to distinguish between morphological types, especially at higher redshifts. This capability can be…

Cosmology and Nongalactic Astrophysics · Physics 2014-03-21 Mercedes T. Richards , Donald St. P. Richards , Elizabeth Martinez-Gomez

A hierarchical structure describing the inter-relationships of species has long been a fundamental concept in systematic biology, from Linnean classification through to the more recent quest for a 'Tree of Life.' In this paper we use an…

Populations and Evolution · Quantitative Biology 2009-08-21 Andreas Dress , Vincent Moulton , Mike Steel , Taoyang Wu

The idea of spatial crosscorrelation was conceived of long ago. However, unlike the related spatial autocorrelation, the theory and method of spatial crosscorrelation analysis have remained undeveloped. This paper presents a set of models…

Physics and Society · Physics 2018-12-19 Yanguang Chen

Graphs are interesting structures: extremely useful to depict real-life problems, extremely easy to understand given a sketch, extremely complicated to represent formally, extremely complicated to compare. Phylogeny is the study of the…

Data Structures and Algorithms · Computer Science 2019-01-18 Bernardo Lopo Tavares

Visual insights into a wide variety of statistical methods, for both didactic and data analytic purposes, can often be achieved through geometric diagrams and geometrically based statistical graphs. This paper extols and illustrates the…

Methodology · Statistics 2013-02-21 Michael Friendly , Georges Monette , John Fox