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In this paper, we consider a linear heat equation with constant coefficients and a single constant delay. Such equations are commonly used to model and study various problems arising in ecology and population biology when describing the…

Analysis of PDEs · Mathematics 2014-01-23 Denys Khusainov , Michael Pokojovy , Elvin Azizbayov

It has been known for many years that small fractions of persister cells resist killing in many bacterial colony-antimicrobial confrontations. These persisters are not believed to be mutants. Rather it has been hypothesized that they are…

Cell Behavior · Quantitative Biology 2007-05-23 I. Klapper , P. Gilbert , B. P. Ayati , J. Dockery , P. S. Stewart

Why are large, complex ecosystems stable? Both theory and simulations of current models predict the onset of instability with growing size and complexity, so for decades it has been conjectured that ecosystems must have some unidentified…

Populations and Evolution · Quantitative Biology 2016-08-11 Samuel Johnson , Virginia Domínguez-García , Luca Donetti , Miguel A. Muñoz

One of simplest examples of navigation found in nature is run-and-tumble chemotaxis. Tumbles reorient cells randomly, and cells can drift toward attractants or away from repellents by biasing the frequency of these events. The post-tumble…

Soft Condensed Matter · Physics 2017-09-14 Julius B. Kirkegaard , Raymond E. Goldstein

A mathematical model of dynamic interaction between mining and processing industries is formalized and studied in the paper. The process of interaction is described by a system of two delay differential equations. The criterion for…

Optimization and Control · Mathematics 2017-06-20 A. I. Kirjanen , O. A. Malafeyev , N. D. Redinskikh

The main purpose of this paper is to provide a summary of the fundamental methods for analyzing delay differential equations arising in biology and medicine. These methods are employed to illustrate the effects of time delay on the behavior…

Dynamical Systems · Mathematics 2017-01-17 Majid Bani-Yaghoub

Flocculation is the process whereby particles (i.e., flocs) in suspension reversibly combine and separate. The process is widespread in soft matter and aerosol physics as well as environmental science and engineering. We consider a general…

Analysis of PDEs · Mathematics 2015-07-28 Inom Mirzaev , David M. Bortz

Microbiomes are complex systems comprised of many interacting species. Species can survive harsh or changing conditions by rapid adaptation, a process accelerated by the exchange of genetic material between different species through…

Populations and Evolution · Quantitative Biology 2025-09-04 Johannes Nauta , Kaitlin A. Schaal , Ying-Jie Wang , James P. J. Hall , Shai Pilosof , Manlio De Domenico

One of the central themes in modern ecology is the enduring debate on whether there is a relationship between the complexity of a biological community and its stability. In this paper, we focus on the role of detritus and spatial dispersion…

Populations and Evolution · Quantitative Biology 2014-06-11 Andrzej Pękalski , Janusz Szwabiński

Gene regulatory dynamics is governed by molecular processes and therefore exhibits an inherent stochasticity. However, for the survival of an organism it is a strict necessity that this intrinsic noise does not prevent robust functioning of…

Molecular Networks · Quantitative Biology 2007-05-23 Stefan Braunewell , Stefan Bornholdt

Foraging site constancy, or repeated return to the same foraging location, is a foraging strategy used by many species to decrease uncertainty, but it is often unclear exactly how the foraging site is identified. Here we focus on the…

Populations and Evolution · Quantitative Biology 2025-03-27 Sarah A. MacQueen , Clara F. Hardy , W. John Braun , Rebecca C. Tyson

We investigate the evolution of tumor growth relying on a nonlinear model of partial differential equations which incorporates mechanical laws for tissue compression combined with rules for nutrients availability and drug application.…

Numerical Analysis · Mathematics 2016-02-23 Konstantina Trivisa , Franziska Weber

We consider the classical two-dimensional Rosenzweig-MacArthur prey-predator model with a degenerate noise, whereby only the prey variable is subject to small environmental fluctuations. This model has already been introduced in…

Probability · Mathematics 2025-11-14 Michel Benaïm , Jérémy Colombo , Edouard Strickler

In this article a generalized mathematical model describing the interactions between malignant tumour and immune system with discrete time delay incorporated into the system is considered. Time delay represents the time required to generate…

Tissues and Organs · Quantitative Biology 2015-11-05 Monika Joanna Piotrowska

In this paper we introduce a model of dynamic crack growth in viscoelastic material, where the damping term depends on the history of the deformation. The model is based on a dynamic energy dissipation balance and on a maximal dissipation…

Analysis of PDEs · Mathematics 2025-10-24 Federico Cianci

In the natural world, there are many insect species whose individual members have a life history that takes them through two stages, immature and mature. Moreover, the rates of survival, development, and reproduction almost always depend on…

Dynamical Systems · Mathematics 2013-02-26 Kunwer Singh Jatav , Joydip Dhar

Organisms that exploit different environments may experience a stochastic delay in adjusting their fitness when they switch habitats. We study two species whose fitness is determined by the species composition of the local environment, as…

Biological Physics · Physics 2019-02-04 Marianne Bauer , Erwin Frey

In this work, we consider a diffuse interface model for tumour growth in the presence of a nutrient which is consumed by the tumour. The system of equations consists of a Cahn--Hilliard equation with source terms for the tumour cells and a…

Numerical Analysis · Mathematics 2022-05-09 Harald Garcke , Dennis Trautwein

Persistence probabilities of the interface height in (1+1)- and (2+1)-dimensional atomistic, solid-on-solid, stochastic models of surface growth are studied using kinetic Monte Carlo simulations, with emphasis on models that belong to the…

Statistical Mechanics · Physics 2007-05-23 M. Constantin , C. Dasgupta , P. Punyindu Chatraphorn , Satya N. Majumdar , S. Das Sarma

The tolerance of bacterial populations to biocidal or antibiotic treatment has been well documented in both biofilm and planktonic settings. However, there is still very little known about the mechanisms that produce this tolerance.…

Populations and Evolution · Quantitative Biology 2008-07-15 Patrick De Leenheer , Nick Cogan