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We develop a novel approach to study the global behaviour of large foodwebs for ecosystems where several species share multiple resources. The model extends and generalize some previous works and takes into account self-limitation. Under…

Dynamical Systems · Mathematics 2019-03-12 Vladimir Kozlov , Vladimir G. Tkachev , Sergey Vakulenko , Uno Wennergren

We consider a general growth mechanism, which acts at cellular level and above (organs, systems and whole organisms). Using its mathematical representation, the growth equation, we study the growth and division mechanisms of amoeba and…

Other Quantitative Biology · Quantitative Biology 2016-10-06 Yuri K. Shestopaloff

Species experience both internal feedbacks with endogenous factors such as trait evolution and external feedbacks with exogenous factors such as weather. These feedbacks can play an important role in determining whether populations persist…

Populations and Evolution · Quantitative Biology 2016-12-21 Swati Patel , Sebastian J Schreiber

We consider a diffuse interface model for tumor growth consisting of a Cahn--Hilliard equation with source terms coupled to a reaction-diffusion equation, which models a tumor growing in the presence of a nutrient species and surrounded by…

Analysis of PDEs · Mathematics 2017-05-04 Harald Garcke , Kei Fong Lam

Cellular nutrient consumption is influenced by both the nutrient uptake kinetics of an individual cell and the cells' spatial arrangement. Large cell clusters or colonies have inhibited growth at the cluster's center due to the shielding of…

Biological Physics · Physics 2013-06-14 Maxim O. Lavrentovich , John H. Koschwanez , David R. Nelson

The Poisson--Dirichlet distribution arises in many different areas. The parameter $\theta$ in the distribution is the scaled mutation rate of a population in the context of population genetics. The limiting case of $\theta$ approaching…

Probability · Mathematics 2008-11-12 Shui Feng , Fuqing Gao

The study of planktonic ecosystems is important as they make up the bottom trophic levels of aquatic food webs. We study a closed Nutrient-Phytoplankton-Zooplankton (NPZ) model that includes size structure in the juvenile zooplankton. The…

Dynamical Systems · Mathematics 2015-05-28 M. Kloosterman , S. A. Campbell , F. J. Poulin

In this paper we study the stability properties of the equilibrium point for an age-structured chemostat model with renewal boundary condition and coupled substrate dynamics under constant dilution rate. This is a complex…

Dynamical Systems · Mathematics 2026-03-27 Iasson Karafyllis , Dionysios Theodosis , Miroslav Krstic

In this paper, we discuss delayed periodic dynamical systems, compare capability of criteria of global exponential stability in terms of various $L^{p}$ ($1\le p<\infty$) norms. A general approach to investigate global exponential stability…

Dynamical Systems · Mathematics 2009-11-13 Yanxu Zheng , Tianping Chen

Microbial communities routinely have several possible species compositions or community states observed for the same environmental parameters. Changes in these parameters can trigger abrupt and persistent transitions (regime shifts) between…

Populations and Evolution · Quantitative Biology 2019-07-03 Veronika Dubinkina , Yulia Fridman , Parth Pratim Pandey , Sergei Maslov

Persistence in spatially extended dynamical systems (like coarsening systems and other nonequilibrium systems) is reviewed. We discuss, in particular, the spatial correlations in the persistent regions and their evolution in time in these…

Statistical Mechanics · Physics 2007-05-23 Purusattam Ray

This paper is concerned with an analysis of the dynamics of a non-autonomous, single population age based growth model with harvesting formulation. First, we derive sufficient conditions for permanence and positive invariance. Then, by…

Populations and Evolution · Quantitative Biology 2020-01-10 N. S. N. V. K. Vyshnavi Devi , Debaldev Jana , M. Lakshmanan

We study delay-independent stability in nonlinear models with a distributed delay which have a positive equilibrium. Such models frequently occur in population dynamics and other applications. In particular, we construct a relevant…

Dynamical Systems · Mathematics 2009-01-12 Elena Braverman , Sergey Zhukovskiy

We propose a model of chemostat where the bacterial population is individually-based, each bacterium is explicitly represented and has a mass evolving continuously over time. The substrate concentration is represented as a conventional…

Probability · Mathematics 2013-11-08 Fabien Campillo , Coralie Fritsch

This article is concerned with pointwise growth and spreading speeds in systems of parabolic partial differential equations. Several criteria exist for quantifying pointwise growth rates. These include the location in the complex plane of…

Pattern Formation and Solitons · Physics 2015-06-17 Matt Holzer , Arnd Scheel

We propose an alternative delayed population growth difference equation model based on a modification of the Beverton-Holt recurrence, assuming a delay only in the growth contribution that takes into account that those individuals that die…

Populations and Evolution · Quantitative Biology 2022-10-24 Sabrina H. Streipert , Gail S. K. Wolkowicz

Stochastic neural networks are a prototypical computational device able to build a probabilistic representation of an ensemble of external stimuli. Building on the relationship between inference and learning, we derive a synaptic plasticity…

Disordered Systems and Neural Networks · Physics 2018-10-23 Luca Saglietti , Federica Gerace , Alessandro Ingrosso , Carlo Baldassi , Riccardo Zecchina

The storage effect is a well-known explanation for coexistence in temporally varying environments. Like many complex ecological theories, the storage effect is often used as an explanation for observed coexistence on the basis of heuristic…

Populations and Evolution · Quantitative Biology 2023-01-13 Evan C. Johnson , Oscar Godoy , Alan Hastings

When steady state chemostat cultures are abruptly exposed to substrate-excess conditions, they exhibit long lags before adjusting to the new environment. The identity of the rate-limiting step for this slow response can be inferred from the…

Molecular Networks · Quantitative Biology 2007-05-23 Jason T. Noel , Brenton Cox , Atul Narang

For dynamical systems arising from chemical reaction networks, persistence is the property that each species concentration remains positively bounded away from zero, as long as species concentrations were all positive in the beginning. We…

Dynamical Systems · Mathematics 2016-07-29 Michael Marcondes de Freitas , Elisenda Feliu , Carsten Wiuf
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