Related papers: Persistence criteria for a chemostat with variable…
Growth rates and biomass yields are key descriptors used in microbiology studies to understand how microbial species respond to changes in the environment. Of these, biomass yield estimates are typically obtained using cell counts and…
Metabolism and evolution are closely connected: if a mutation incurs extra energetic costs for an organism, there is a baseline selective disadvantage that may or may not be compensated for by other adaptive effects. A long-standing, but to…
We show how highly-diverse ecological communities may display persistent abundance fluctuations, when interacting through resource competition and subjected to migration from a species pool. This turns out to be closely related to the ratio…
It is well-known that wave-type equations with memory, under appropriate assumptions on the memory kernel, are uniformly exponentially stable. On the other hand, time delay effects may destroy this behavior. Here, we consider the…
In this paper, a new global exponential stability criterion is obtained for a general multidimensional delay difference equation using induction arguments. In the cases that the difference equation is periodic, we prove the existence of a…
The persistence properties of a set of random walkers obeying the A+B -> 0 reaction, with equal initial density of particles and homogeneous initial conditions, is studied using two definitions of persistence. The probability, P(t), that an…
The existence of travelling waves for a model of concentration waves of bacteria is investigated. The model consists in a kinetic equation for the biased motion of cells following a run-and-tumble process, coupled with two…
We consider a stochastic individual-based model of adaptive dynamics for an asexually reproducing population with mutation, with linear birth and death rates, as well as a density-dependent competition. To depict repeating changes of the…
We study the fate of a forager who searches for food performing a random walk on lattices. The forager consumes the available food on the site it visits and leaves it depleted but can survive up to $S$ steps without food. We introduce the…
During batch growth on mixtures of two growth-limiting substrates, microbes consume the substrates either sequentially or simultaneously. These growth patterns are manifested in all types of bacteria and yeasts. The ubiquity of these growth…
This paper considers the behavior of discrete and continuous mathematical models for gene expression in the presence of transcriptional/translational bursting. We treat this problem in generality with respect to the distribution of the…
We study the stability of a Markovian model of electricity production and consumption that incorporates production volatility due to renewables and uncertainty about actual demand versus planned production. We assume that the energy…
This paper studies a chemotaxis system where cells move in response to a chemical signal within a confined habitat. The model includes external source terms that combine local and nonlocal growth with dampening effects. The main focus is on…
The growth rate of organisms depends both on external conditions and on internal states, such as the expression levels of various genes. We show that to achieve a criterion mean growth rate over an ensemble of conditions, the internal…
Self-cycling fermentation is an automated process used for culturing microorganisms. We consider a model of $n$ distinct species competing for a single non-reproducing nutrient in a self-cycling fermentor in which the nutrient level is used…
This paper develops necessary and sufficient conditions for the preservation of asymptotic convergence rates of deterministically and stochastically perturbed ordinary differential equations with regularly varying nonlinearity close to…
Microbial communities routinely have several alternative stable states observed for the same environmental parameters. Sudden and irreversible transitions between these states make external manipulation of these systems more complicated. To…
In this paper, we consider the dynamics of a delayed reaction-diffusion mussel-algae system subject to Neumann boundary conditions. When the delay is zero, we show the existence of positive solutions and the global stability of the boundary…
The reaction-diffusion processes in a growing domain involves a dilution term that modifies the properties of the homogeneous state that, in contrast to a fixed domain, depends on time. We study how the dilution term changes the steady…
In this paper, we study a well known two-step anaerobic digestion model in a configuration of two chemostats in series. This model is an eight-dimensional system of ordinary differential equations. Since the reaction system has a cascade…