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Boolean networks (BNs) are discrete-time systems where nodes are inter-connected (here we call such connection rule among nodes as network structure), and the dynamics of each gene node is determined by logical functions. In this paper, we…

Systems and Control · Electrical Eng. & Systems 2020-11-03 Jie Zhong , Daniel W. C. Ho , Jianquan Lu

This paper investigates the stabilization of probabilistic Boolean networks (PBNs) via a novel pinning control strategy based on network structure. In a PBN, the evolution equation of each gene switches among a collection of candidate…

Systems and Control · Electrical Eng. & Systems 2020-10-26 Lin Lin , Jinde Cao , Jianquan Lu , Jie Zhong

This paper focuses on proposing a general control framework for large-scale Boolean networks (\texttt{BNs}). Only by the network structure, the concept of structural controllability for \texttt{BNs} is formalized. A necessary and sufficient…

Systems and Control · Electrical Eng. & Systems 2021-05-27 Shiyong Zhu , Jianquan Lu , Shun-ichi Azuma , Wei Xing Zheng

In this paper, a set of sensors is constructed via the pinning observability approach with the help of observability criteria given in [1] and [2], in order to make the given Boolean network (BN) be observable. Given the assumption that…

Systems and Control · Electrical Eng. & Systems 2022-03-08 Shiyong Zhu , Jianquan Lu , Jie Zhong , Yang Liu , Jinde Cao

Regulatory networks (RNs) are a well-accepted modelling formalism in computational systems biology. The control of RNs is currently receiving a lot of attention because it provides a computational basis for cell reprogramming -- an…

Systems and Control · Electrical Eng. & Systems 2022-03-01 Luboš Brim , Samuel Pastva , David Šafránek , Eva Šmijáková

Boolean networks are discrete dynamical systems in which the state (zero or one) of each node is updated at each time t to a state determined by the states at time t-1 of those nodes that have links to it. When these systems are used to…

Molecular Networks · Quantitative Biology 2012-02-28 Andrew Pomerance , Michelle Girvan , Ed Ott

Boolean networks have been used successfully in modeling biological networks and provide a good framework for theoretical analysis. However, the analysis of large networks is not trivial. In order to simplify the analysis of such networks,…

Molecular Networks · Quantitative Biology 2013-11-29 Alan Veliz-Cuba , Reinhard Laubenbacher , Boris Aguilar

Boolean networks have been proposed as potentially useful models for genetic control. An important aspect of these networks is the stability of their dynamics in response to small perturbations. Previous approaches to stability have assumed…

Molecular Networks · Quantitative Biology 2015-05-13 Andrew Pomerance , Edward Ott , Michelle Girvan , Wolfgang Losert

In this paper, we study the network pinning control problem in the presence of two different types of coupling: (i) node-to-node coupling among the network nodes and (ii) input-to-node coupling from the source node to the `pinned nodes'.…

Systems and Control · Electrical Eng. & Systems 2022-11-23 Shirin Panahi , Matteo Lodi , Marco Storace , Francesco Sorrentino

We study distributed control of networked systems through reinforcement learning, where neural policies must be simultaneously scalable, expressive and stabilizing. We introduce a policy parameterization that embeds Graph Neural Networks…

Systems and Control · Electrical Eng. & Systems 2026-05-27 John Cao , Luca Furieri

Distributed sensor networks often include a multitude of sensors, each measuring parts of a process state space or observing the operations of a system. Communication of measurements between the sensor nodes and estimator(s) cannot…

Systems and Control · Electrical Eng. & Systems 2023-05-02 Sanjay Chandrasekaran , Vishnu Varadan , Siva Vignesh Krishnan , Florian Dörfler , Mohammad H. Mamduhi

This paper studies stochastic aperiodic stabilization of a networked control system (NCS) consisting of a continuous-time plant and a discrete-time controller. The plant and the controller are assumed to be connected by communication…

Systems and Control · Electrical Eng. & Systems 2022-03-08 Yohei Hosoe

We study the problem of computing a minimal subset of nodes of a given asynchronous Boolean network that need to be controlled to drive its dynamics from an initial steady state (or attractor) to a target steady state. Due to the phenomenon…

Systems and Control · Computer Science 2018-05-18 Soumya Paul , Cui Su , Jun Pang , Andrzej Mizera

This paper studies the distributed L2-gain control problem for continuous-time large-scale systems under Round-Robin communication protocol. In this protocol, each sub-controller obtains its own subsystem's state information continuously,…

Systems and Control · Electrical Eng. & Systems 2020-01-07 Tao Yu , Junlin Xiong

We study the stability of networks of multi-agent systems with local pinning strategies and two types of time delays, namely the transmission delay in the network and the pinning delay of the controllers. Sufficient conditions for stability…

Systems and Control · Computer Science 2016-04-05 Wenlian Lu , Fatihcan M. Atay

This paper investigates sensor scheduling for state estimation of complex networks over shared transmission channels. For a complex network of dynamical systems, referred to as nodes, a sensor network is adopted to measure and estimate the…

Systems and Control · Electrical Eng. & Systems 2023-01-12 Peihu Duan , Lidong He , Lingying Huang , Guanrong Chen , Ling Shi

Probabilistic Boolean networks (PBNs) is an important mathematical framework widely used for modelling and analysing biological systems. PBNs are suited for modelling large biological systems, which more and more often arise in systems…

Computational Engineering, Finance, and Science · Computer Science 2016-05-04 Andrzej Mizera , Jun Pang , Qixia Yuan

We consider the possibility of using stabilizer states to perform deterministic dense coding among multiple senders and a single receiver. In the model we studied, the utilized stabilizer state is partitioned into several subsystems and…

Quantum Physics · Physics 2011-08-26 Guoming Wang , Mingsheng Ying

Many biological systems, such as metabolic pathways, exhibit bistability behavior: these biological systems exhibit two distinct stable states with switching between the two stable states controlled by certain conditions. Since…

Quantitative Methods · Quantitative Biology 2013-07-04 Yi Ming Zou

This paper studies the stability of synchronized states in networks where couplings between nodes are characterized by some distributed time delay, and develops a generalized master stability function approach. Using a generic example of…

Chaotic Dynamics · Physics 2014-10-28 Y. N. Kyrychko , K. B. Blyuss , E. Schoell
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