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In this study, to address the current high earlydetection miss rate of colorectal cancer (CRC) polyps, we explore the potentials of utilizing transfer learning and machine learning (ML) classifiers to precisely and sensitively classify the…

Image and Video Processing · Electrical Eng. & Systems 2022-11-10 Nethra Venkatayogi , Ozdemir Can Kara , Jeff Bonyun , Naruhiko Ikoma , Farshid Alambeigi

Pulmonary pathologies are a significant global health concern, often leading to fatal outcomes if not diagnosed and treated promptly. Chest radiography serves as a primary diagnostic tool, but the availability of experienced radiologists…

Image and Video Processing · Electrical Eng. & Systems 2024-12-17 Abdelbaki Souid , Mohamed Hamroun , Soufiene Ben Othman , Hedi Sakli , Naceur Abdelkarim

Recent artificial intelligence (AI) algorithms have achieved radiologist-level performance on various medical classification tasks. However, only a few studies addressed the localization of abnormal findings from CXR scans, which is…

Image and Video Processing · Electrical Eng. & Systems 2022-08-09 Hieu H. Pham , Ha Q. Nguyen , Hieu T. Nguyen , Linh T. Le , Lam Khanh

The automatic generation of radiology reports given medical radiographs has significant potential to operationally and improve clinical patient care. A number of prior works have focused on this problem, employing advanced methods from…

Computer Vision and Pattern Recognition · Computer Science 2019-07-30 Guanxiong Liu , Tzu-Ming Harry Hsu , Matthew McDermott , Willie Boag , Wei-Hung Weng , Peter Szolovits , Marzyeh Ghassemi

For the Convolutional Neural Networks (CNNs) applied in the intelligent diagnosis of gastric cancer, existing methods mostly focus on individual characteristics or network frameworks without a policy to depict the integral information.…

Computer Vision and Pattern Recognition · Computer Science 2020-10-20 Changhao Sun , Chen Li , Jinghua Zhang , Muhammad Rahaman , Shiliang Ai , Hao Chen , Frank Kulwa , Yixin Li , Xiaoyan Li , Tao Jiang

Numerous deep learning-based solutions have been proposed for histopathological image analysis over the past years. While they usually demonstrate exceptionally high accuracy, one key question is whether their precision might be affected by…

Image and Video Processing · Electrical Eng. & Systems 2024-09-19 Andrey Ignatov , Grigory Malivenko

Detecting and segmenting brain metastases is a tedious and time-consuming task for many radiologists, particularly with the growing use of multi-sequence 3D imaging. This study demonstrates automated detection and segmentation of brain…

Image and Video Processing · Electrical Eng. & Systems 2019-12-30 Endre Grøvik , Darvin Yi , Michael Iv , Elisabeth Tong , Daniel L. Rubin , Greg Zaharchuk

Objective: Clinical trials are essential for advancing pharmaceutical interventions, but they face a bottleneck in selecting eligible participants. Although leveraging electronic health records (EHR) for recruitment has gained popularity,…

Computation and Language · Computer Science 2026-01-15 Mojdeh Rahmanian , Seyed Mostafa Fakhrahmad , Seyedeh Zahra Mousavi

We address the challenge of extracting structured information from business documents without detailed annotations. We propose Deep Conditional Probabilistic Context Free Grammars (DeepCPCFG) to parse two-dimensional complex documents and…

Computation and Language · Computer Science 2021-06-08 Freddy C. Chua , Nigel P. Duffy

Precise prognostic stratification of colorectal cancer (CRC) remains a major clinical challenge due to its high heterogeneity. The conventional TNM staging system is inadequate for personalized medicine. We aimed to develop and validate a…

Machine Learning · Computer Science 2025-11-20 Zisong Wang , Xuanyu Wang , Hang Chen , Haizhou Wang , Yuxin Chen , Yihang Xu , Yunhe Yuan , Lihuan Luo , Xitong Ling , Xiaoping Liu

We apply deep learning-based language models to the task of patient cohort retrieval (CR) with the aim to assess their efficacy. The task of CR requires the extraction of relevant documents from the electronic health records (EHRs) on the…

Information Retrieval · Computer Science 2020-09-14 Sarvesh Soni , Kirk Roberts

Free text comments (FTC) in patient-reported outcome measures (PROMs) data are typically analysed using manual methods, such as content analysis, which is labour-intensive and time-consuming. Machine learning analysis methods are largely…

Computation and Language · Computer Science 2023-08-14 Anna-Grace Linton , Vania Dimitrova , Amy Downing , Richard Wagland , Adam Glaser

Colon and Lung cancer is one of the most perilous and dangerous ailments that individuals are enduring worldwide and has become a general medical problem. To lessen the risk of death, a legitimate and early finding is particularly required.…

Computer Vision and Pattern Recognition · Computer Science 2021-03-24 Satvik Garg , Somya Garg

Automatic extraction of clinical concepts is an essential step for turning the unstructured data within a clinical note into structured and actionable information. In this work, we propose a clinical concept extraction model for automatic…

Computation and Language · Computer Science 2018-11-28 Henghui Zhu , Ioannis Ch. Paschalidis , Amir Tahmasebi

Processing information locked within clinical health records is a challenging task that remains an active area of research in biomedical NLP. In this work, we evaluate a broad set of machine learning techniques ranging from simple RNNs to…

Colorectal cancer screening through colonoscopy continues to be the dominant global standard, as it allows identifying pre-cancerous or adenomatous lesions and provides the ability to remove them during the procedure itself. Nevertheless,…

Computer Vision and Pattern Recognition · Computer Science 2023-06-08 Netanel Frank , Erez Posner , Emmanuelle Muhlethaler , Adi Zholkover , Moshe Bouhnik

Case Report Forms (CRFs) collect data about patients and are at the core of well-established practices to conduct research in clinical settings. With the recent progress of language technologies, there is an increasing interest in automatic…

Computation and Language · Computer Science 2026-02-27 Gabriela Anna Kaczmarek , Pietro Ferrazzi , Lorenzo Porta , Vicky Rubini , Bernardo Magnini

Accurate and timely detection of medical adverse events (AEs) from free-text medical narratives is challenging. Natural language processing (NLP) with deep learning has already shown great potential for analyzing free-text data, but its…

Computation and Language · Computer Science 2020-11-26 Alireza Borjali , Martin Magneli , David Shin , Henrik Malchau , Orhun K. Muratoglu , Kartik M. Varadarajan

Digitization of histopathology slides has led to several advances, from easy data sharing and collaborations to the development of digital diagnostic tools. Deep learning (DL) methods for classification and detection have shown great…

Image and Video Processing · Electrical Eng. & Systems 2020-05-25 Apostolia Tsirikoglou , Karin Stacke , Gabriel Eilertsen , Martin Lindvall , Jonas Unger

AIM To analyse the performance of a deep-learning (DL) algorithm currently deployed as diagnostic decision support software in two NHS Trusts used to identify normal chest x-rays in active clinical pathways. MATERIALS AND METHODS A DL…

Computer Vision and Pattern Recognition · Computer Science 2023-06-29 Jordan Smith , Tom Naunton Morgan , Paul Williams , Qaiser Malik , Simon Rasalingham