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A simple, but ``classical``, stochastic model for epidemic spread in a finite, but large, population is studied. The progress of the epidemic can be divided into three different phases that requires different tools to analyse. Initially the…

Populations and Evolution · Quantitative Biology 2018-05-29 Åke Svensson

Historically, infectious diseases caused considerable damage to human societies, and they continue to do so today. To help reduce their impact, mathematical models of disease transmission have been studied to help understand disease…

Approximate Bayesian Computation (ABC) methods rely on asymptotic arguments, implying that parameter inference can be systematically biased even when sufficient statistics are available. We propose to construct the ABC accept/reject step…

Methodology · Statistics 2014-01-24 Oliver Ratmann , Anton Camacho , Adam Meijer , Gé Donker

We consider the spread of a supercritical stochastic SIR (Susceptible, Infectious, Recovered) epidemic on a configuration model random graph. We mainly focus on the final stages of a large outbreak and provide limit results for the duration…

Probability · Mathematics 2020-02-26 Abid Ali Lashari , Ana Serafimović , Pieter Trapman

In Part 1, we introduced a stochastic model of an infectious disease, based on the BDI (birth and death with immigration) process. We showed that random processes defined by this model can capture the essence of the stochastic, often…

Populations and Evolution · Quantitative Biology 2021-01-28 Hisashi Kobayashi

This paper is focused on SIS (Susceptible-Infected-Susceptible) epidemic dynamics (also known as the contact process) on populations modelled by homogeneous Poisson point processes of the Euclidean plane, where the infection rate of a…

Probability · Mathematics 2021-08-19 François Baccelli , Nithin Ramesan

The spreading of infectious diseases with and without immunization of individuals can be modeled by stochastic processes that exhibit a transition between an active phase of epidemic spreading and an absorbing phase, where the disease dies…

Statistical Mechanics · Physics 2009-11-10 Stephan M. Dammer , Haye Hinrichsen

We analyze a periodically-forced dynamical system inspired by the SIR model with impulsive vaccination. We fully characterize its dynamics according to the proportion $p$ of vaccinated individuals and the time $T$ between doses. If the…

Dynamical Systems · Mathematics 2024-08-02 João P. S. Maurício de Carvalho , Alexandre A. Rodrigues

Controlling and understanding epidemic outbreaks has recently drawn great interest in a large spectrum of research communities. Vaccination is one of the most well-established and effective strategies in order to contain an epidemic. In the…

Social and Information Networks · Computer Science 2023-05-29 Sourin Chatterjee , Ahad N. Zehmakan

This paper uses new and existing methods to study collective trends across countries throughout the pandemic, with a focus on the multivariate time series of reproduction numbers and vaccine proliferation. We begin with a time-varying…

Physics and Society · Physics 2023-10-16 Nick James , Max Menzies

Early on during a pandemic, vaccine availability is limited, requiring prioritisation of different population groups. Evaluating vaccine allocation is therefore a crucial element of pandemics response. In the present work, we develop a…

The paper presents an algorithm for syndromic surveillance of an epidemic outbreak formulated in the context of stochastic nonlinear filtering. The dynamics of the epidemic is modeled using a generalized compartmental epidemiological model…

Quantitative Methods · Quantitative Biology 2011-10-24 Alex Skvortsov , Branko Ristic

In this article, we develop a data assimilation procedure to predict the evolution of epidemics with data uncertainty, with application to the Covid-19 pandemic. We construct a vademecum of solutions by solving the SIR epidemic model for a…

Populations and Evolution · Quantitative Biology 2020-04-28 T. Chacon Rebollo , D. Franco Coronil

We study the interaction between epidemic spreading and a vaccination process. We assume that, similar to the disease spreading, also the vaccination process occurs through direct contact, i.e., it follows the standard…

Physics and Society · Physics 2020-06-22 Mozhgan Khanjanianpak , Nahid Azimi-Tafreshi , Claudio Castellano

Mathematical modeling of epidemic propagation on networks is extended to hypergraphs in order to account for both the community structure and the nonlinear dependence of the infection pressure on the number of infected neighbours. The exact…

Dynamical Systems · Mathematics 2016-10-31 Ágnes Bodó , Gyula Y. Katona , Péter L. Simon

We study epidemic models where the infectivity of each individual is a random function of the infection age (the elapsed time of infection). To describe the epidemic evolution dynamics, we use a stochastic process that tracks the number of…

Probability · Mathematics 2023-01-02 Guodong Pang , Etienne Pardoux

An accurate closed-form solution is obtained to the SIR Epidemic Model through the use of Asymptotic Approximants (Barlow et. al, 2017, Q. Jl Mech. Appl. Math, 70 (1), 21-48). The solution is created by analytically continuing the divergent…

Populations and Evolution · Quantitative Biology 2021-01-05 Nathaniel S. Barlow , Steven J. Weinstein

We consider the simple epidemiological SIS model for a general heterogeneous population introduced by Lajmanovich and Yorke (1976) in finite dimension, and its infinite dimensional generalization we introduced in previous works. In this…

Dynamical Systems · Mathematics 2022-11-29 Jean-François Delmas , Dylan Dronnier , Pierre-André Zitt

Characterizing the spatial extent of epidemics at the outbreak stage is key to controlling the evolution of the disease. At the outbreak, the number of infected individuals is typically small, so that fluctuations around their average are…

Populations and Evolution · Quantitative Biology 2013-03-21 Eric Dumonteil , Satya N. Majumdar , Alberto Rosso , Andrea Zoia

We introduce a fast simulation technique for modeling epidemics on adaptive networks. Our rejection-based algorithm efficiently simulates the co-evolution of the network structure and the epidemic dynamics. We extend the classical SIS model…

Social and Information Networks · Computer Science 2024-10-08 Gerrit Großmann , Sebastian Vollmer