Related papers: String Attractors for Automatic Sequences
Sequence theories are an extension of theories of strings with an infinite alphabet of letters, together with a corresponding alphabet theory (e.g. linear integer arithmetic). Sequences are natural abstractions of extendable arrays, which…
Let $S$ be a string of length $n$ with characters from an alphabet of size $\sigma$. The \emph{subsequence automaton} of $S$ (often called the \emph{directed acyclic subsequence graph}) is the minimal deterministic finite automaton…
The worst-case additive sensitivity of a string repetitiveness measure $c$ is defined to be the largest difference between $c(w)$ and $c(w')$, where $w$ is a string of length $n$ and $w'$ is a string that can be obtained by performing a…
Given a right-infinite word $\bf x$ over a finite alphabet $A$, the rank of $\bf x$ is the size of the smallest set $S$ of words over $A$ such that $\bf x$ can be realized as an infinite concatenation of words in $S$. We show that the…
In this paper we develop combinatorial techniques for the case of string algebras with the aim to give a characterization of string complexes with infinite minimal projective resolution. These complexes will be called \textit{periodic…
In the Shortest Common Superstring problem (SCS), one needs to find the shortest superstring for a set of strings. While SCS is NP-hard and MAX-SNP-hard, the Greedy Algorithm "choose two strings with the largest overlap; merge them; repeat"…
Given an alphabet $S$, we consider the size of the subsets of the full sequence space $S^{\rm {\bf Z}}$ determined by the additional restriction that $x_i\not=x_{i+f(n)},\ i\in {\rm {\bf Z}},\ n\in {\rm {\bf N}}.$ Here $f$ is a positive,…
In this paper, we consider the problem of identifying patterns of interest in colored strings. A colored string is a string where each position is assigned one of a finite set of colors. Our task is to find substrings of the colored string…
We propose novel algorithms for sequence prediction based on ideas from stringology. These algorithms are time and space efficient and satisfy mistake bounds related to particular stringological complexity measures of the sequence. In this…
Unlike in statistical compression, where Shannon's entropy is a definitive lower bound, no such clear measure exists for the compressibility of repetitive sequences. Since statistical entropy does not capture repetitiveness, ad-hoc measures…
We study the satisfiability of string constraints where context-free membership constraints may be imposed on variables. Additionally a variable may be constrained to be a subword of a word obtained by shuffling variables and their…
Let $k\ge 2$. We prove that the characteristic sequence of a regular language over a $k$-letter alphabet is $k$-automatic. More generally, if $t\ge 2$ and $t,k$ are multiplicatively dependent, we show that the characteristic sequence of a…
The sensitivity of a string compression algorithm $C$ asks how much the output size $C(T)$ for an input string $T$ can increase when a single character edit operation is performed on $T$. This notion enables one to measure the robustness of…
A string is said to be closed if its length is one, or if it has a non-empty factor that occurs both as a prefix and as a suffix of the string, but does not occur elsewhere. The notion of closed words was introduced by [Fici, WORDS 2011].…
An infinite binary sequence has randomness rate at least $\sigma$ if, for almost every $n$, the Kolmogorov complexity of its prefix of length $n$ is at least $\sigma n$. It is known that for every rational $\sigma \in (0,1)$, on one hand,…
A border of a string is a non-empty prefix of the string that is also a suffix of the string, and a string is unbordered if it has no border other than itself. Loptev, Kucherov, and Starikovskaya [CPM 2015] conjectured the following: If we…
Despite their apparent simplicity, random Boolean networks display a rich variety of dynamical behaviors. Much work has been focused on the properties and abundance of attractors. We here derive an expression for the number of attractors in…
This paper investigates the dimension theory of some families of continuous piecewise linear iterated function systems. For one family, we show that the Hausdorff dimension of the attractor is equal to the exponential growth rate obtained…
The longest common subsequence (LCS) is a fundamental problem in string processing which has numerous algorithmic studies, extensions, and applications. A sequence $u_1, \ldots, u_f$ of $f$ strings s said to be an ($f$-)segmentation of a…
We say a string has a cadence if a certain character is repeated at regular intervals, possibly with intervening occurrences of that character. We call the cadence anchored if the first interval must be the same length as the others. We…