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We investigate states of enhanced activity in a biological neuronal network composed of pulse-coupled oscillators. The synaptic couplings between the neurons are dynamic, modeling spike time dependent plasticity. The network exhibits…

Disordered Systems and Neural Networks · Physics 2012-08-17 Daniel Ritterskamp , Rudolf Friedrich

We analyze atom-surface magnetic interactions on atom chips where the magnetic trapping potentials are produced by current carrying wires made of electrically anisotropic materials. We discuss a theory for time dependent fluctuations of the…

Other Condensed Matter · Physics 2008-07-03 T. David , Y. Japha , V. Dikovsky , R. Salem , C. Henkel , R. Folman

Biological systems, particularly the brain, are frequently analyzed as networks, conveying mechanistic insights into their function and pathophysiology. This is the first study of a functional network of cardiac tissue. We use calcium…

Quantitative Methods · Quantitative Biology 2024-05-31 Anna V. Maltsev , Yasir Z. Barlas , Adina Hazan , Rui Zhang , Michela Ottolia , Joshua I. Goldhaber

The first-principal simulations are applied to study a photo-induced metastability in amorphous selenium (a-Se) and the contribution of the valence-alteration pair (VAP) defects in this process. The VAP defect is confirmed to be the…

Materials Science · Physics 2014-02-26 J. Berashevich , A. Mishchenko , A. Reznik

Molecular communication (MC) studies biological signals that are found in nature. Most MC literature focuses on particle properties, even though many natural phenomena exhibit wave-like behavior. One such signal is sound waves.…

Signal Processing · Electrical Eng. & Systems 2025-12-02 Fatih Merdan , Ozgur B. Akan

We report experimental studies of a driven spin-mechanical system, in which a nitrogen vacancy (NV) center couples to out-of-plane vibrations of a diamond cantilever through the excited-state deformation potential. Photoluminescence…

Mesoscale and Nanoscale Physics · Physics 2023-04-11 Xinzhu Li , Hailin Wang

Cell assemblies manipulation by optogenetics is pivotal to advance neuroscience and neuroengineering. In in vivo applications, photostimulation often broadly addresses a population of cells simultaneously, leading to feed-forward and to…

Neurons and Cognition · Quantitative Biology 2016-04-08 Rocco Pulizzi , Gabriele Musumeci , Chris Van Den Haute , Sebastian Van De Vijver , Veerle Baekelandt , Michele Giugliano

Relationships between plants and insects vitally underpin the health of global ecosystems and food production. Through co-evolution, insects have acquired a variety of senses in response to the emergence of floral cues such as scent, colour…

Biological Physics · Physics 2025-04-07 Samuel J. Harris , Ryan A. Palmer , N. R. McDonald

Recent studies have revealed the complex structure of nerve signals in axons. There is experimental evidence that the propagation of an electrical signal (action potential) is accompanied by mechanical and thermal effects. In this paper,…

Biological Physics · Physics 2020-09-21 Jüri Engelbrecht , Kert Tamm , Tanel Peets

We apply an information theoretic treatment of action potential time series measured with microelectrode arrays to estimate the connectivity of mammalian neuronal cell assemblies grown {\it in vitro}. We infer connectivity between two…

Neurons and Cognition · Quantitative Biology 2007-05-23 Luis M. A. Bettencourt , Greg J. Stephens , Michael I. Ham , Guenter W. Gross

The leaf-like origami structure was inspired by geometric patterns found in nature, exhibiting unique transitions between open and closed shapes. With a bistable energy landscape, leaf-like origami is able to replicate the autonomous…

Robotics · Computer Science 2020-11-04 Hiromi Yasuda , Kyle Johnson , Vicente Arroyos , Koshiro Yamaguchi , Jordan R. Raney , Jinkyu Yang

To sustain metabolism, intracellular ATP concentration must be regulated within an appropriate range. This coordination is achieved through the function of the AMP-activated protein kinase (AMPK), a cellular "fuel gauge" that is expressed…

Tissues and Organs · Quantitative Biology 2019-11-07 Benoit Viollet

We present a method for achieving temporally and spatially precise photoactivation of neurons without the need for genetic expression of photosensitive proteins. Our method depends upon conduction of thermal energy via absorption by a dye…

Biological Physics · Physics 2012-07-04 Benjamin Migliori , Massimiliano Di Ventra , William Kristan

A generation mechanism of super Alfv\'{e}nic (SPA) waves in multi-ion species plasma is proposed and the associated heavy ion acceleration process is discussed. The SPA waves are thought to play important roles in particle acceleration…

Space Physics · Physics 2020-01-09 S. Matsukiyo , T. Akamizu , T. Hada

Controlling energy transfer through vibronic resonance is an interesting possibility. Exact treatment of non-adiabatic vibronic coupling is necessary to fully capture its role in driving energy transfer. However, exact treatment of…

Chemical Physics · Physics 2024-06-19 Sanjoy Patra , Amitav Sahu , Vivek Tiwari

Weakly electric fish, like Gnathonemus petersii, use a remarkable electrical modality for active sensing and communication, but studying their rich electrosensing and electrocommunication behavior and associated neural activity in…

Active fluctuations are detected in a growing number of systems due to self-propulsion mechanisms or collisions with active environment. They drive the system far from equilibrium and can induce phenomena which at equilibrium states are…

Statistical Mechanics · Physics 2024-09-12 K. Białas , J. Łuczka , J. Spiechowicz

In the past decade, the cell-type specific connectivity and activity of local cortical networks have been characterized experimentally to some detail. In parallel, modeling has been established as a tool to relate network structure to…

Neurons and Cognition · Quantitative Biology 2011-06-29 Tobias C. Potjans , Markus Diesmann

Since the first experimental evidences of active conductances in dendrites, most neurons have been shown to exhibit dendritic excitability through the expression of a variety of voltage-gated ion channels. However, despite experimental and…

Neurons and Cognition · Quantitative Biology 2012-01-18 Leonardo L. Gollo , Osame Kinouchi , Mauro Copelli

The ongoing activity of neurons generates a spatially- and time-varying field of extracellular voltage ($V_e$). This $V_e$ field reflects population-level neural activity, but does it modulate neural dynamics and the function of neural…

Neurons and Cognition · Quantitative Biology 2015-08-10 Joshua H. Goldwyn , John Rinzel
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