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Functional connectomes capture brain interactions via synchronized fluctuations in the functional magnetic resonance imaging signal. If measured during rest, they map the intrinsic functional architecture of the brain. With task-driven…

Neurons and Cognition · Quantitative Biology 2013-04-16 Gaël Varoquaux , R. C. Craddock

Effective connectivity analysis provides an understanding of the functional organization of the brain by studying how activated regions influence one other. We propose a nonparametric Bayesian approach to model effective connectivity…

Applications · Statistics 2011-07-22 Sourabh Bhattacharya , Ranjan Maitra

Multi-modal populations of networks arise in many scenarios including in large-scale multi-modal neuroimaging studies that capture both functional and structural neuroimaging data for thousands of subjects. A major research question in such…

Methodology · Statistics 2023-12-25 Jiaming Liu , Lili Zheng , Zhengwu Zhang , Genevera I. Allen

High-dimensional imaging of neural activity, such as widefield calcium and functional ultrasound imaging, provide a rich source of information for understanding the relationship between brain activity and behavior. Accurately modeling…

Neurons and Cognition · Quantitative Biology 2025-09-24 Mohammad Hosseini , Maryam M. Shanechi

Automatic segmentation of medical images is crucial in modern clinical workflows. The Segment Anything Model (SAM) has emerged as a versatile tool for image segmentation without specific domain training, but it requires human prompts and…

Computer Vision and Pattern Recognition · Computer Science 2024-05-16 Yunxiang Li , Bowen Jing , Zihan Li , Jing Wang , You Zhang

Computer-aided diagnosis (CAD) systems play a crucial role in analyzing neuroimaging data for neurological and psychiatric disorders. However, small-sample studies suffer from low reproducibility, while large-scale datasets introduce…

Machine Learning · Computer Science 2025-08-12 Xinglin Zhao , Yanwen Wang , Xiaobo Liu , Yanrong Hao , Rui Cao , Xin Wen

An increasingly important goal of psychiatry is the use of brain imaging data to develop predictive models. Here we present two contributions to statistical methodology for this purpose. First, we propose and compare a set of wavelet-domain…

Applications · Statistics 2015-09-17 Philip T. Reiss , Lan Huo , Yihong Zhao , Clare Kelly , R. Todd Ogden

Sparse linear regression methods including the well-known LASSO and the Dantzig selector have become ubiquitous in the engineering practice, including in medical imaging. Among other tasks, they have been successfully applied for the…

Signal Processing · Electrical Eng. & Systems 2023-01-03 Anna Pidnebesna , Iveta Fajnerova , Jiri Horacek , Jaroslav Hlinka

Single Index Models (SIMs) are simple yet flexible semi-parametric models for machine learning, where the response variable is modeled as a monotonic function of a linear combination of features. Estimation in this context requires learning…

Machine Learning · Statistics 2016-12-01 Nikhil Rao , Ravi Ganti , Laura Balzano , Rebecca Willett , Robert Nowak

Functional Principal Component Analysis is a reference method for dimension reduction of curve data. Its theoretical properties are now well understood in the simplified case where the sample curves are fully observed without noise.…

Methodology · Statistics 2025-04-28 Ryad Belhakem , Franck Picard , Vincent Rivoirard , Angelina Roche

Estimated connectomes by the means of neuroimaging techniques have enriched our knowledge of the organizational properties of the brain leading to the development of network-based clinical diagnostics. Unfortunately, to date, many of those…

Neurons and Cognition · Quantitative Biology 2018-05-31 Roseric Azondekon , Zachary James Harper , Charles Michael Welzig

In recent years, functional magnetic resonance imaging has emerged as a powerful tool for investigating the human brain's functional connectivity networks. Related studies demonstrate that functional connectivity networks in the human brain…

Artificial Intelligence · Computer Science 2023-09-18 Xiangzhu Meng , Wei Wei , Qiang Liu , Shu Wu , Liang Wang

Magnetic resonance (MR) imaging is an essential diagnostic tool in clinical medicine. Recently, a variety of deep learning methods have been applied to segmentation tasks in medical images, with promising results for computer-aided…

Deep neural networks have been demonstrated impressive results in various cognitive tasks such as object detection and image classification. In order to execute large networks, Von Neumann computers store the large number of weight…

Neural and Evolutionary Computing · Computer Science 2015-08-06 Jaeyong Chung , Taehwan Shin , Yongshin Kang

Radiological images such as computed tomography (CT) and X-rays render anatomy with intrinsic structures. Being able to reliably locate the same anatomical structure across varying images is a fundamental task in medical image analysis. In…

Computer Vision and Pattern Recognition · Computer Science 2023-10-24 Ke Yan , Jinzheng Cai , Dakai Jin , Shun Miao , Dazhou Guo , Adam P. Harrison , Youbao Tang , Jing Xiao , Jingjing Lu , Le Lu

Independent component analysis (ICA) is a popular tool for investigating brain organization in neuroscience research. In fMRI studies, an important goal is to study how brain networks are modulated by subjects' clinical and demographic…

Computation · Statistics 2020-04-08 Joshua Lukemire , Yikai Wang , Amit Verma , Ying Guo

We study the problem of sparse signal detection on a spatial domain. We propose a novel approach to model continuous signals that are sparse and piecewise smooth as product of independent Gaussian processes (PING) with a smooth covariance…

In this paper, we focus on the semantic image synthesis task that aims at transferring semantic label maps to photo-realistic images. Existing methods lack effective semantic constraints to preserve the semantic information and ignore the…

Computer Vision and Pattern Recognition · Computer Science 2020-09-01 Hao Tang , Song Bai , Nicu Sebe

The use of the structural similarity index (SSIM) is widespread. For almost two decades, it has played a major role in image quality assessment in many different research disciplines. Clearly, its merits are indisputable in the research…

Image and Video Processing · Electrical Eng. & Systems 2020-07-01 Jim Nilsson , Tomas Akenine-Möller

Cardiac image segmentation is essential for automated cardiac function assessment and monitoring of changes in cardiac structures over time. Inspired by coarse-to-fine approaches in image analysis, we propose a novel multitask compositional…

Image and Video Processing · Electrical Eng. & Systems 2024-10-31 Abbas Khan , Muhammad Asad , Martin Benning , Caroline Roney , Gregory Slabaugh