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In large-scale image retrieval, many indexing methods have been proposed to narrow down the searching scope of retrieval. The features extracted from images usually are of high dimensions or unfixed sizes due to the existence of key points.…

Computer Vision and Pattern Recognition · Computer Science 2021-09-15 Ying Wang , Tingzhen Liu , Zepeng Bu , Yuhui Huang , Lizhong Gao , Qiao Wang

Currently, the deep neural network is the mainstream for machine learning, and being actively developed for biomedical imaging applications with an increasing emphasis on tomographic reconstruction for MRI, CT, and other imaging modalities.…

Medical Physics · Physics 2018-05-31 Qing Lyu , Tao Xu , Hongming Shan , Ge Wang

A central challenge in the computational modeling of neural dynamics is the trade-off between accuracy and simplicity. At the level of individual neurons, nonlinear dynamics are both experimentally established and essential for neuronal…

Identifying a coupled dynamical system out of many plausible candidates, each of which could serve as the underlying generator of some observed measurements, is a profoundly ill posed problem that commonly arises when modelling real world…

Neurons and Cognition · Quantitative Biology 2019-09-17 Amirhossein Jafarian , Peter Zeidman , Vladimir Litvak , Karl Friston

In neuroscience, functional brain connectivity describes the connectivity between brain regions that share functional properties. Neuroscientists often characterize it by a time series of covariance matrices between functional measurements…

Methodology · Statistics 2019-07-09 Zhenhua Lin , Dehan Kong , Qiang Sun

Spontaneous brain activity, as observed in functional neuroimaging, has been shown to display reproducible structure that expresses brain architecture and carries markers of brain pathologies. An important view of modern neuroscience is…

Machine Learning · Statistics 2010-11-15 Gaël Varoquaux , Alexandre Gramfort , Jean Baptiste Poline , Bertrand Thirion

The aim of this paper is to provide a comprehensive review of statistical challenges in neuroimaging data analysis from neuroimaging techniques to large-scale neuroimaging studies to statistical learning methods. We briefly review eight…

Applications · Statistics 2022-10-18 Hongtu Zhu , Tengfei Li , Bingxin Zhao

Replicability is a cornerstone of science. The partial conjunction (PC) hypothesis testing framework objectively quantifies replicability across disciplines. Although several statistical methodologies for testing PC hypotheses exist, it is…

Methodology · Statistics 2026-03-18 Monitirtha Dey , Anna Vesely , Thorsten Dickhaus

The extraordinary advancements in neuroscientific technology for brain recordings over the last decades have led to increasingly complex spatio-temporal datasets. To reduce oversimplifications, new models have been developed to be able to…

Methodology · Statistics 2020-09-22 Nicolo' Margaritella , Vanda Inacio , Ruth King

Brain surface-based image registration, an important component of brain image analysis, establishes spatial correspondence between cortical surfaces. Existing iterative and learning-based approaches focus on accurate registration of folding…

Image and Video Processing · Electrical Eng. & Systems 2023-10-18 Jian Li , Greta Tuckute , Evelina Fedorenko , Brian L. Edlow , Bruce Fischl , Adrian V. Dalca

Despite the advances of deep learning in specific tasks using images, the principled assessment of image fidelity and similarity is still a critical ability to develop. As it has been shown that Mean Squared Error (MSE) is insufficient for…

Image and Video Processing · Electrical Eng. & Systems 2019-08-27 Benyamin Ghojogh , Fakhri Karray , Mark Crowley

Imbalanced image datasets are commonly available in the domain of biomedical image analysis. Biomedical images contain diversified features that are significant in predicting targeted diseases. Generative Adversarial Networks (GANs) are…

Image and Video Processing · Electrical Eng. & Systems 2022-11-15 Muhammad Muneeb Saad , Mubashir Husain Rehmani , Ruairi O'Reilly

Objectives: Analyze the types of studies and algorithms that are most applied, Identify the anatomical regions treated. Determine the application of parallel techniques used in studies carried out between 2010 and 2022 in research on noise…

Image and Video Processing · Electrical Eng. & Systems 2023-01-05 Sussana M. Florez-Aroni , Mijail A. Hancco-Condori , Fred Torres-Cruz

Understanding the relationship between the dynamics of neural processes and the anatomical substrate of the brain is a central question in neuroscience. On the one hand, modern neuroimaging technologies, such as diffusion tensor imaging,…

Computer-assisted diagnosis (CAD) based on deep learning has become a crucial diagnostic technology in the medical industry, effectively improving diagnosis accuracy. However, the scarcity of brain tumor Magnetic Resonance (MR) image…

Computer Vision and Pattern Recognition · Computer Science 2021-11-30 Panjian Huang , Xu Liu , Yongzhen Huang

Independent component analysis (ICA) is popular in many applications, including cognitive neuroscience and signal processing. Due to computational constraints, principal component analysis is used for dimension reduction prior to ICA…

Methodology · Statistics 2017-10-03 Benjamin B. Risk , David S. Matteson , David Ruppert

Bayesian spatial modeling provides a flexible framework for whole-brain fMRI analysis by explicitly incorporating spatial dependencies, overcoming the limitations of traditional massive univariate approaches that lead to information waste.…

Methodology · Statistics 2025-11-18 Yuan Zhong , Gang Chen , Paul A. Taylor , Jian Kang

We propose a method that would allow for a rigorous statistical analysis of neural responses to natural stimuli, which are non-Gaussian and exhibit strong correlations. We have in mind a model in which neurons are selective for a small…

Biological Physics · Physics 2007-05-23 Tatyana Sharpee , Nicole C. Rust , William Bialek

The use of principal component methods to analyze functional data is appropriate in a wide range of different settings. In studies of ``functional data analysis,'' it has often been assumed that a sample of random functions is observed…

Statistics Theory · Mathematics 2016-08-16 Peter Hall , Hans-Georg Müller , Jane-Ling Wang

Functional Magnetic Resonance Images acquired during resting-state provide information about the functional organization of the brain through measuring correlations between brain areas. Independent components analysis is the reference…

Neurons and Cognition · Quantitative Biology 2014-12-15 Alexandre Abraham , Elvis Dohmatob , Bertrand Thirion , Dimitris Samaras , Gael Varoquaux
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