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This paper demonstrates that language models are strong structure-based protein designers. We present LM-Design, a generic approach to reprogramming sequence-based protein language models (pLMs), that have learned massive sequential…

Machine Learning · Computer Science 2023-02-10 Zaixiang Zheng , Yifan Deng , Dongyu Xue , Yi Zhou , Fei YE , Quanquan Gu

Spiking neural networks (SNNs) have closer dynamics to the brain than current deep neural networks. Their low power consumption and sample efficiency make these networks interesting. Recently, several deep convolutional spiking neural…

Computer Vision and Pattern Recognition · Computer Science 2022-11-01 Shahriar Rezghi Shirsavar , Mohammad-Reza A. Dehaqani

In recent years, the CNN architectures designed by evolution algorithms have proven to be competitive with handcrafted architectures designed by experts. However, these algorithms need a lot of computational power, which is beyond the…

Computer Vision and Pattern Recognition · Computer Science 2023-05-08 Ousmane Youme , Jean Marie Dembele , Eugene C. Ezin , Christophe Cambier

A design problem of finding an optimally stiff membrane structure by selecting one-dimensional fiber reinforcements is formulated and solved. The membrane model is derived in a novel manner from a particular three-dimensional linear elastic…

Numerical Analysis · Mathematics 2016-09-13 Anders Klarbring , Bo Torstenfelt , Peter Hansbo , Mats G. Larson

Multi-bit spiking neural networks (SNNs) have recently become a heated research spot, pursuing energy-efficient and high-accurate AI. However, with more bits involved, the associated memory and computation demands escalate to the point…

Neural and Evolutionary Computing · Computer Science 2025-12-02 Xingting Yao , Qinghao Hu , Fei Zhou , Tielong Liu , Gang Li , Peisong Wang , Jian Cheng

Spiking neural networks (SNNs) have emerged as a promising candidate for energy-efficient LLM inference. However, current energy evaluations for SNNs primarily focus on counting accumulate operations, and fail to account for real-world…

Machine Learning · Computer Science 2026-02-02 Zhanglu Yan , Kaiwen Tang , Zixuan Zhu , Zhenyu Bai , Qianhui Liu , Weng-Fai Wong

Radio Frequency (RF) sensing holds the potential for enabling pervasive monitoring applications. However, modern sensing algorithms imply complex operations, which clash with the energy-constrained nature of edge sensing devices. This calls…

Signal Processing · Electrical Eng. & Systems 2024-01-30 Eleonora Cicciarella , Riccardo Mazzieri , Jacopo Pegoraro , Michele Rossi

Computational experiments are exploited in finding a well-designed processing path to optimize material structures for desired properties. This requires understanding the interplay between the processing-(micro)structure-property linkages…

Computational Engineering, Finance, and Science · Computer Science 2023-05-04 Junrong Lin , Mahmudul Hasan , Pinar Acar , Jose Blanchet , Vahid Tarokh

In real-world applications, it is important for machine learning algorithms to be robust against data outliers or corruptions. In this paper, we focus on improving the robustness of a large class of learning algorithms that are formulated…

Machine Learning · Computer Science 2021-06-04 Quanming Yao , Hangsi Yang , En-Liang Hu , James Kwok

Spiking Neural Networks (SNNs) have incorporated more biologically-plausible structures and learning principles, hence are playing critical roles in bridging the gap between artificial and natural neural networks. The spikes are the sparse…

Neural and Evolutionary Computing · Computer Science 2020-10-08 Xiang Cheng , Tielin Zhang , Shuncheng Jia , Bo Xu

Drug resistance is a major threat to the global health and a significant concern throughout the clinical treatment of diseases and drug development. The mutation in proteins that is related to drug binding is a common cause for adaptive…

Quantitative Methods · Quantitative Biology 2022-05-18 Ziyi Yang , Zhaofeng Ye , Yijia Xiao , Changyu Hsieh , Shengyu Zhang

Spiking Neural Networks (SNNs), with their inherent recurrence, offer an efficient method for processing the asynchronous temporal data generated by Dynamic Vision Sensors (DVS), making them well-suited for event-based vision applications.…

Hardware Architecture · Computer Science 2024-11-06 Deepika Sharma , Shubham Negi , Trishit Dutta , Amogh Agrawal , Kaushik Roy

Computational drug design based on artificial intelligence is an emerging research area. At the time of writing this paper, the world suffers from an outbreak of the coronavirus SARS-CoV-2. A promising way to stop the virus replication is…

Neural and Evolutionary Computing · Computer Science 2020-09-11 Tim Cofala , Lars Elend , Philip Mirbach , Jonas Prellberg , Thomas Teusch , Oliver Kramer

Machine learning with artificial neural networks (ANNs), provides solutions for the growing complexity of modern communication systems. This complexity, however, increases power consumption, making the systems energy-intensive. Spiking…

Signal Processing · Electrical Eng. & Systems 2026-01-26 Eike-Manuel Edelmann

Spiking neural networks (SNNs) are becoming a promising alternative to conventional artificial neural networks (ANNs) due to their rich neural dynamics and the implementation of energy-efficient neuromorphic chips. However, the…

Artificial Intelligence · Computer Science 2024-08-27 Jiahao Su , Kang You , Zekai Xu , Weizhi Xu , Zhezhi He

Spiking Neural Network (SNN) is the third generation of Neural Network (NN) mimicking the natural behavior of the brain. By processing based on binary input/output, SNNs offer lower complexity, higher density and lower power consumption.…

Neural and Evolutionary Computing · Computer Science 2020-03-24 Khanh N. Dang , Abderazek Ben Abdallah

Despite the numerous uses of semidefinite programming (SDP) and its universal solvability via interior point methods (IPMs), it is rarely applied to practical large-scale problems. This mainly owes to the computational cost of IPMs that…

Optimization and Control · Mathematics 2024-03-19 Yifan Ran , Stefan Vlaski , Wei Dai

We introduce the maximum $n$-times coverage problem that selects $k$ overlays to maximize the summed coverage of weighted elements, where each element must be covered at least $n$ times. We also define the min-cost $n$-times coverage…

Quantitative Methods · Quantitative Biology 2022-05-06 Ge Liu , Alexander Dimitrakakis , Brandon Carter , David Gifford

Machine learning algorithms in high-dimensional settings are highly susceptible to the influence of even a small fraction of structured outliers, making robust optimization techniques essential. In particular, within the…

Machine Learning · Computer Science 2025-04-25 Changyu Gao , Andrew Lowy , Xingyu Zhou , Stephen J. Wright

Biomolecular computation has emerged as an important area of computer science research due to its high information density, immense parallelism opportunity along with potential applications in cryptography, genetic engineering and…

Formal Languages and Automata Theory · Computer Science 2022-06-07 Anupam Chattopadhyay , Arnab Chakrabarti