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In group testing, the task is to determine the distinguished members of a set of objects L by asking subset queries of the form ``does the subset Q of L contain a distinguished object?'' The primary biological application of group testing…

Combinatorics · Mathematics 2008-02-03 Emanuel Knill , S. Muthukrishnan

This paper considers the noisy group testing problem where among a large population of items some are defective. The goal is to identify all defective items by testing groups of items, with the minimum possible number of tests. The focus of…

Information Theory · Computer Science 2021-10-20 Esmaeil Karimi , Anoosheh Heidarzadeh , Krishna R. Narayanan , Alex Sprintson

Group testing is a useful method that has broad applications in medicine, engineering, and even in airport security control. Consider a finite population of $N$ items, where item $i$ has a probability $p_i$ to be defective. The goal is to…

Other Statistics · Statistics 2017-04-17 Yaakov Malinovsky

We consider the group testing problem, in the case where the items are defective independently but with non-constant probability. We introduce and analyse an algorithm to solve this problem by grouping items together appropriately. We give…

Information Theory · Computer Science 2015-02-04 Tom Kealy , Oliver Johnson , Robert Piechocki

We consider the problem of non-adaptive group testing of $N$ items out of which $K$ or less items are known to be defective. We propose a testing scheme based on left-and-right-regular sparse-graph codes and a simple iterative decoder. We…

Information Theory · Computer Science 2017-01-27 Avinash Vem , Nagaraj T. Janakiraman , Krishna R. Narayanan

In this note, we present a new adaptive algorithm for generalized group testing, which is asymptotically optimal if $d=o(\log_2|E|)$, $E$ is a set of potentially contaminated sets, $d$ is a maximal size of elements of $E$. Also, we design a…

Information Theory · Computer Science 2022-11-09 Ilya Vorobyev

The goal of group testing is to efficiently identify a few specific items, called positives, in a large population of items via tests. A test is an action on a subset of items which returns positive if the subset contains at least one…

Information Theory · Computer Science 2021-11-08 Thach V. Bui , Mahdi Cheraghchi , An T. H. Nguyen , Thuc D. Nguyen

In this paper, we propose algorithms that leverage a known community structure to make group testing more efficient. We consider a population organized in disjoint communities: each individual participates in a community, and its infection…

Information Theory · Computer Science 2021-03-18 Pavlos Nikolopoulos , Tao Guo , Sundara Rajan Srinivasavaradhan , Christina Fragouli , Suhas Diggavi

Learning a hidden hypergraph is a natural generalization of the classical group testing problem that consists in detecting unknown hypergraph $H_{un}=H(V,E)$ by carrying out edge-detecting tests. In the given paper we focus our attention…

Information Theory · Computer Science 2016-07-05 A. G. D'yachkov , I. V. Vorobyev , N. A. Polyanskii , V. Yu. Shchukin

In this paper, we consider the group testing problem with adaptive test designs and noisy outcomes. We propose a computationally efficient four-stage procedure with components including random binning, identification of bins containing…

Computation · Statistics 2019-11-11 Jonathan Scarlett

The goal of group testing is to identify a small number of defective items within a large population. In the non-adaptive setting, tests are designed in advance and represented by a measurement matrix $\mM$, where rows correspond to tests…

Information Theory · Computer Science 2025-09-10 Trung-Khang Tran , Thach V. Bui

We study group-testing algorithms for resolving broadcast conflicts on a multiple access channel (MAC) and for identifying the dead sensors in a mobile ad hoc wireless network. In group-testing algorithms, we are asked to identify all the…

Data Structures and Algorithms · Computer Science 2009-05-13 Michael T. Goodrich , Daniel S. Hirschberg

In this paper, we study the problem of non-adaptive group testing, in which one seeks to identify which items are defective given a set of suitably-designed tests whose outcomes indicate whether or not at least one defective item was…

Information Theory · Computer Science 2025-09-26 Lan V. Truong , Matthew Aldridge , Jonathan Scarlett

Given $d$ defective items in a population of $n$ items with $d \ll n$, in threshold group testing without gap, the outcome of a test on a subset of items is positive if the subset has at least $u$ defective items and negative otherwise,…

Information Theory · Computer Science 2024-05-10 Thach V. Bui , Yeow Meng Chee , Van Khu Vu

We consider the isomorphism problem for hypergraphs taking as input two hypergraphs over the same set of vertices $V$ and a permutation group $\Gamma$ over domain $V$, and asking whether there is a permutation $\gamma \in \Gamma$ that…

Data Structures and Algorithms · Computer Science 2022-10-26 Daniel Neuen

Group testing tackles the problem of identifying a population of $K$ defective items from a set of $n$ items by pooling groups of items efficiently in order to cut down the number of tests needed. The result of a test for a group of items…

Information Theory · Computer Science 2015-08-20 Kangwook Lee , Ramtin Pedarsani , Kannan Ramchandran

When fitting statistical models, some predictors are often found to be correlated with each other, and functioning together. Many group variable selection methods are developed to select the groups of predictors that are closely related to…

Methodology · Statistics 2021-03-25 Zhiyuan Li

We study the problem of identifying defective units in a finite population of \( n \) units, where each unit \( i \) is independently defective with known probability \( p_i \). This setting is referred to as the \emph{Generalized Group…

Statistics Theory · Mathematics 2025-06-23 Yaakov Malinovsky , Viktor Skorniakov

We describe a generalization of the group testing problem termed symmetric group testing. Unlike in classical binary group testing, the roles played by the input symbols zero and one are "symmetric" while the outputs are drawn from a…

Information Theory · Computer Science 2011-08-16 Amin Emad , Jun Shen , Olgica Milenkovic

In this paper, an exact bitwise MAP (Maximum A Posteriori) estimation algorithm for group testing problems is presented. We assume a simplest non-adaptive group testing scenario including N-objects with binary status and M-disjunctive…

Information Theory · Computer Science 2014-01-20 Tadashi Wadayama , Taisuke Izumi
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