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Trees and the associated shortest-path tree metrics provide a powerful framework for representing hierarchical and combinatorial structures in data. Given an arbitrary metric space, its deviation from a tree metric can be quantified by…

Machine Learning · Computer Science 2025-09-26 Pierre Houedry , Nicolas Courty , Florestan Martin-Baillon , Laetitia Chapel , Titouan Vayer

We study the problem of how well a tree metric is able to preserve the sum of pairwise distances of an arbitrary metric. This problem is closely related to low-stretch metric embeddings and is interesting by its own flavor from the line of…

Data Structures and Algorithms · Computer Science 2013-01-16 Mong-Jen Kao , Der-Tsai Lee , Dorothea Wagner

Maximum parsimony distance is a measure used to quantify the dissimilarity of two unrooted phylogenetic trees. It is NP-hard to compute, and very few positive algorithmic results are known due to its complex combinatorial structure. Here we…

Data Structures and Algorithms · Computer Science 2020-04-07 Mark Jones , Steven Kelk , Leen Stougie

The Robinson-Foulds (RF) metric is arguably the most widely used measure of phylogenetic tree similarity, despite its well-known shortcomings: For example, moving a single taxon in a tree can result in a tree that has maximum distance to…

Data Structures and Algorithms · Computer Science 2013-08-02 Sebastian Böcker , Stefan Canzar , Gunnar W. Klau

Branchwidth determines how graphs, and more generally, arbitrary connectivity (basically symmetric and submodular) functions could be decomposed into a tree-like structure by specific cuts. We develop a general framework for designing…

Data Structures and Algorithms · Computer Science 2021-11-08 Fedor V. Fomin , Tuukka Korhonen

The Traveling Salesman Problem (TSP) is a classic and extensively studied problem with numerous real-world applications in artificial intelligence and operations research. It is well-known that TSP admits a constant approximation ratio on…

Data Structures and Algorithms · Computer Science 2025-12-02 Jingyang Zhao , Zimo Sheng , Mingyu Xiao

This work considers the problem of computing distances between structured objects such as undirected graphs, seen as probability distributions in a specific metric space. We consider a new transportation distance (i.e. that minimizes a…

Machine Learning · Statistics 2019-05-14 Titouan Vayer , Laetitia Chapel , Rémi Flamary , Romain Tavenard , Nicolas Courty

We show that for various classes C of sparse graphs, and several measures of distance to such classes (such as edit distance and elimination distance), the problem of determining the distance of a given graph G to C is fixed-parameter…

Data Structures and Algorithms · Computer Science 2015-02-23 Jannis Bulian , Anuj Dawar

The Hausdorff distance measures how far apart two sets are in a common metric space. By contrast, the Gromov-Hausdorff distance provides a notion of distance between two abstract metric spaces. How do these distances behave for quotients of…

In this paper we present a novel probabilistic sampling-based motion planning algorithm called the Fast Marching Tree algorithm (FMT*). The algorithm is specifically aimed at solving complex motion planning problems in high-dimensional…

Robotics · Computer Science 2015-02-09 Lucas Janson , Edward Schmerling , Ashley Clark , Marco Pavone

We study the problem of finding a minimum-distortion embedding of the shortest path metric of an unweighted graph into a "simpler" metric $X$. Computing such an embedding (exactly or approximately) is a non-trivial task even when $X$ is the…

Computational Geometry · Computer Science 2017-12-20 Timothy Carpenter , Fedor V. Fomin , Daniel Lokshtanov , Saket Saurabh , Anastasios Sidiropoulos

Gromov-Wasserstein (GW) is a powerful tool to compare probability measures whose supports are in different metric spaces. GW suffers however from a computational drawback since it requires to solve a complex non-convex quadratic program. We…

Machine Learning · Statistics 2020-06-18 Tam Le , Nhat Ho , Makoto Yamada

The Gromov-Wasserstein distance is a notable extension of optimal transport. In contrast to the classic Wasserstein distance, it solves a quadratic assignment problem that minimizes the pair-wise distance distortion under the transportation…

Machine Learning · Computer Science 2024-04-16 Wei Zhang , Zihao Wang , Jie Fan , Hao Wu , Yong Zhang

We define a distance analogous to the Gromov-Hausdorff distance that enables the comparison of arbitrary quasi-isometric spaces. We also investigate properties preserved under limits with respect to this distance, as well as properties of…

Metric Geometry · Mathematics 2026-05-28 Alexei Naianzin

The number of the non-shared edges of two phylogenies is a basic measure of the dissimilarity between the phylogenies. The non-shared edges are also the building block for approximating a more sophisticated metric called the nearest…

Data Structures and Algorithms · Computer Science 2007-05-23 Wing-Kai Hon , Ming-Yang Kao , Tak-Wah Lam , Wing-Kin Sung , Siu-Ming Yiu

We revisit the issue of low-distortion embedding of metric spaces into the line, and more generally, into the shortest path metric of trees, from the parameterized complexity perspective.Let $M=M(G)$ be the shortest path metric of an edge…

Data Structures and Algorithms · Computer Science 2008-04-21 Michael Fellows , Fedor Fomin , Daniel Lokshtanov , Elena Losievskaja , Frances A. Rosamond , Saket Saurabh

Cross-lingual or cross-domain correspondences play key roles in tasks ranging from machine translation to transfer learning. Recently, purely unsupervised methods operating on monolingual embeddings have become effective alignment tools.…

Computation and Language · Computer Science 2018-09-05 David Alvarez-Melis , Tommi S. Jaakkola

Rotation distance between trees measures the number of simple operations it takes to transform one tree into another. There are no known polynomial-time algorithms for computing rotation distance. In the case of ordered rooted trees, we…

Data Structures and Algorithms · Computer Science 2018-03-19 Sean Cleary , Katherine St. John

In this paper, we apply the concept of asymptotic dimension to calculating Gromov-Hausdorff distances between some unbounded metric spaces. For example, we show that the Gromov--Hausdorff between $\mathbb{R}^2$ with the Euclidean metric and…

Metric Geometry · Mathematics 2025-05-27 Ivan N. Mikhailov

We revisit the Maximum Node-Disjoint Paths problem, the natural optimization version of Node-Disjoint Paths, where we are given a graph $G$, $k$ pairs of vertices $(s_i, t_i)$ and an integer $\ell$, and are asked whether there exist at…

Data Structures and Algorithms · Computer Science 2025-09-18 Michael Lampis , Manolis Vasilakis