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Density dependent Markov population processes with countably many types can often be well approximated over finite time intervals by the solution of the differential equations that describe their average drift, provided that the total…

Probability · Mathematics 2014-06-05 A. D. Barbour , Malwina Luczak

The discourse surrounding the structural organization of mutualistic interactions mostly revolves around modularity and nestedness. The former is known to enhance the stability of communities, while the latter is related to their…

Physics and Society · Physics 2024-07-10 Aniello Lampo , María J. Palazzi , Javier Borge-Holthoefer , Albert Solé-Ribalta

Understanding the influence of an environment on the evolution of its resident population is a major challenge in evolutionary biology. Great progress has been made in homogeneous population structures while heterogeneous structures have…

Populations and Evolution · Quantitative Biology 2014-07-30 Wes Maciejewski , Gregory J. Puleo

Ecological spatial patterns reflect the underlying processes that shape the structure of species and communities. Mechanisms like inter and intra species competition, dispersal and host-pathogen interactions are believed to act over a wide…

Populations and Evolution · Quantitative Biology 2020-07-01 Efrat Seri , Elad Shtilerman , Nadav M. Shnerb

Evolutionary dynamics is often viewed as a subtle process of change accumulation that causes a divergence among organisms and their genomes. However, this interpretation is an inheritance of a gradualistic view that has been challenged at…

Populations and Evolution · Quantitative Biology 2018-07-27 Jacobo Aguirre , Pablo Catalán , José A. Cuesta , Susanna Manrubia

A two-species spatially extended system of hosts and parasitoids is studied. There are two distinct kinds of coexistence; one with populations distributed homogeneously in space and another one with spatiotemporal patterns. In the latter…

Populations and Evolution · Quantitative Biology 2009-02-19 Matti Peltomaki , Martin Rost , Mikko Alava

We introduce and analyze a spatial Lotka-Volterra competition model with local and nonlocal interactions. We study two alternative classes of nonlocal competition that differ in how each species' characteristics determine the range of the…

Populations and Evolution · Quantitative Biology 2021-07-14 Gabriel Andreguetto Maciel , Ricardo Martinez-Garcia

Dispersal is a well recognized driver of ecological and evolutionary dynamics, and simultaneously an evolving trait. Dispersal evolution has traditionally been studied in single-species metapopulations so that it remains unclear how…

Anthropogenic activity threatens biodiversity through climate change, habitat fragmentation, and increasing frequency and scale of disturbance. Various theoretical studies have sought to shed light on how these factors could promote or…

Populations and Evolution · Quantitative Biology 2026-04-01 Isaac Planas-Sitjà , Ryosuke Iritani , Adam L. Cronin

The adoption of agroecological practices will be crucial to address the challenges of climate change and biodiversity loss. Such practices favor the cultivation of plants in complex mixtures with layouts differing from the monoculture…

Populations and Evolution · Quantitative Biology 2024-09-26 Julian Talbot , Pascal Viot , David Colliaux

The robustness of connectivity and the efficiency of paths are incompatible in many real networks. We propose a self-organization mechanism for incrementally generating onion-like networks with positive degree-degree correlations whose…

Physics and Society · Physics 2016-05-09 Yukio Hayashi

When can complex ecological interactions drive an entire ecosystem into a persistent non-equilibrium state, where species abundances keep fluctuating without going to extinction? We show that high-diversity spatially-extended systems, in…

Populations and Evolution · Quantitative Biology 2019-08-27 Felix Roy , Matthieu Barbier , Giulio Biroli , Guy Bunin

The original Hardenberg's model of biomass patterns in arid and semi-arid regions is revisited to extend it to more general non flat regions. It is proposed a technique to study these more generalized (non-flat) regions using both a…

Populations and Evolution · Quantitative Biology 2019-03-19 Rubén Martínez D , Andrea Montiel P. , J. F. Rojas

Microbial ecosystems are commonly modeled by fixed interactions between species in steady exponential growth states. However, microbes often modify their environments so strongly that they are forced out of the exponential state into…

Populations and Evolution · Quantitative Biology 2024-01-08 Avaneesh V. Narla , Terence Hwa , Arvind Murugan

We study analytically and numerically a model metabolic cycle composed of an arbitrary number of species of catalytically active particles. Each species converts a substrate into a product, the latter being used as the substrate by the next…

Soft Condensed Matter · Physics 2023-09-29 Vincent Ouazan-Reboul , Jaime Agudo-Canalejo , Ramin Golestanian

We study the dynamics of a local load sharing fiber bundle model in two dimensions, under an external load (which increases with time at a fixed slow rate) applied at a single point. Due to the local load sharing nature, the redistributed…

Statistical Mechanics · Physics 2013-10-09 Soumyajyoti Biswas , Bikas K. Chakrabarti

In a geographically distributed population, assortative clustering plays an important role in evolution by modifying local environments. To examine its effects in a linear habitat, we consider a one-dimensional grid of cells, where each…

Populations and Evolution · Quantitative Biology 2021-03-16 Sunhee Chae , Nahyeon Lee , Seung Ki Baek , Hyeong-Chai Jeong

This study introduces a novel theoretical framework, the Stacked Autoencoder Evolution Hypothesis, which proposes that biological evolutionary systems operate through multi-layered self-encoding and decoding processes, analogous to stacked…

Neural and Evolutionary Computing · Computer Science 2026-02-03 Hiroyuki Iizuka

Quantifying the spatial organization of human settlements is fundamental to understanding the complexity of urban systems. However, the quantitative patterns of the distribution of villages, towns, and cities that lie between random and…

Physics and Society · Physics 2023-07-06 Lei Dong

Real networks often grow through the sequential addition of new nodes that connect to older ones in the graph. However, many real systems evolve through the branching of fundamental units, whether those be scientific fields, countries, or…

Physics and Society · Physics 2020-06-30 Muhua Zheng , Guillermo García-Pérez , Marián Boguñá , M. Ángeles Serrano