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This work is devoted to studying the dynamics of a structured population that is subject to the combined effects of environmental stochasticity, competition for resources, spatio-temporal heterogeneity and dispersal. The population is…

Probability · Mathematics 2018-01-24 Alexandru Hening , Dang H. Nguyen , George Yin

Subgraphs and cycles are often used to characterize the local properties of complex networks. Here we show that the subgraph structure of real networks is highly time dependent: as the network grows, the density of some subgraphs remains…

Disordered Systems and Neural Networks · Physics 2009-11-11 Alexei Vazquez , Joao G. Oliveira , Albert-Laszlo Barabasi

The changes on abiotic features of ecosystems have rarely been taken into account by population dynamics models, which typically focus on trophic and competitive interactions between species. However, understanding the population dynamics…

Populations and Evolution · Quantitative Biology 2017-08-14 Caroline Franco , José F. Fontanari

Marine plankton play a crucial role in carbon storage, oxygen production, global climate, and ecosystem function. Planktonic ecosystems are embedded in a Lagrangian patches of water that are continuously moving, stretching, and diluting.…

Populations and Evolution · Quantitative Biology 2023-01-30 Enrico Ser-Giacomi , Ricardo Martinez-Garcia , Stephanie Dutkiewicz , Michael J. Follows

Localised patterns are often observed in models for dryland vegetation, both as peaks of vegetation in a desert state and as gaps within a vegetated state, known as `fairy circles'. Recent results from radial spatial dynamics show that…

Dynamical Systems · Mathematics 2024-10-14 Dan J. Hill

We study the spatial patterns formed by a system of interacting particles where the mobility of any individual is determined by the population crowding at two different spatial scales. In this way we model the behavior of some biological…

Statistical Mechanics · Physics 2015-07-08 Ricardo Martínez-García , Clara Murgui , Emilio Hernández-García , Cristóbal López

In this work, an individual-based model of forest insect outbreaks is presented. The results obtained show that the outbreak is an emerging feature of the system. It is a common product of the characteristics of insects, the environment in…

Populations and Evolution · Quantitative Biology 2024-05-15 Janusz Uchmański

Understanding the assembly of ecosystems to estimate the number of species at different spatial scales is a challenging problem. Until now, maximum entropy approaches have lacked the important feature of considering space in an explicit…

Populations and Evolution · Quantitative Biology 2014-07-10 Matteo Adorisio , Jacopo Grilli , Samir Suweis , Sandro Azaele , Jayanth R. Banavar , Amos Maritan

A particular sequence of patterns, "$\text{gaps} \to \text{labyrinth} \to \text{spots}$," occurs with decreasing precipitation in previously reported numerical simulations of PDE dryland vegetation models. These observations have led to the…

Pattern Formation and Solitons · Physics 2016-03-31 Karna Gowda , Yuxin Chen , Sarah Iams , Mary Silber

This paper investigates the dynamics of vegetation patterns in water-limited ecosystems using a generalized Klausmeier model that incorporates non-local plant dispersal within a finite habitat. We establish the well-posedness of the system…

Analysis of PDEs · Mathematics 2026-01-27 Maciej Tadej , Ricardo Martinez-Garcia , Michael Hecht

Drylands are pattern-forming systems showing self-organized vegetation patchiness, multiplicity of stable states and fronts separating domains of alternative stable states. Pattern dynamics, induced by droughts or disturbances, can result…

Pattern Formation and Solitons · Physics 2014-03-05 Yuval R. Zelnik , Shai Kinast , Hezi Yizhaq , Golan Bel , Ehud Meron

We study the evolution of the network properties of a populated network embedded in a genotype space characterised by either a low or a high number of potential links, with particular emphasis on the connectivity and clustering. Evolution…

Statistical Mechanics · Physics 2007-05-23 Paul Anderson , Henrik Jeldtoft Jensen

Networks in nature are often formed within a spatial domain in a dynamical manner, gaining links and nodes as they develop over time. We propose a class of spatially-based growing network models and investigate the relationship between the…

Physics and Society · Physics 2013-12-30 Ari Zitin , Alex Gorowora , Shane Squires , Mark Herrera , Thomas M. Antonsen , Michelle Girvan , Edward Ott

Banded patterns consisting of alternating bare soil and dense vegetation have been observed in water-limited ecosystems across the globe, often appearing along gently sloped terrain with the stripes aligned transverse to the elevation…

Pattern Formation and Solitons · Physics 2023-06-16 Punit Gandhi , Lucien Werner , Sarah Iams , Karna Gowda , Mary Silber

Ecological networks describe the interactions between different species, informing us of how they rely on one another for food, pollination and survival. If a species in an ecosystem is under threat of extinction, it can affect other…

Populations and Evolution · Quantitative Biology 2023-07-06 Chris Jones , Damaris Zurell , Karoline Wiesner

A primary motivation for our research in Digital Ecosystems is the desire to exploit the self-organising properties of biological ecosystems. Ecosystems are thought to be robust, scalable architectures that can automatically solve complex,…

Neural and Evolutionary Computing · Computer Science 2016-11-18 G. Briscoe , S. Sadedin , G. Paperin

Biological evolution can be conceptualized as a search process in the space of gene sequences guided by the fitness landscape, a mapping that assigns a measure of reproductive value to each genotype. Here we discuss probabilistic models of…

Populations and Evolution · Quantitative Biology 2024-04-10 Joachim Krug , Daniel Oros

A fragmented landscape reduces the impact of interspecies connectivity, leading to higher diversity levels than otherwise possible in a connected landscape. Reconnecting a previously fragmented landscape initiates an extinction event,…

Populations and Evolution · Quantitative Biology 2026-04-14 Russell K. Standish

What determines biodiversity in nature is a prominent issue in ecology, especially in biotic resource systems that are typically devoid of cross-feeding. Here, we show that by incorporating pairwise encounters among consumer individuals…

Populations and Evolution · Quantitative Biology 2025-06-18 Ju Kang , Shijie Zhang , Yiyuan Niu , Xin Wang

Understanding the causes and effects of spatial aggregation is one of the most fundamental problems in ecology. Aggregation is an emergent phenomenon arising from the interactions between the individuals of the population, able to sense…

Populations and Evolution · Quantitative Biology 2015-06-05 Juan A. Bonachela , Miguel A. Munoz , Simon A. Levin
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